RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 DYRK1BQ9Y463 629 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 CLCA1A8K7I4 914 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 CDK1P06493 297 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 ADORA3P0DMS8 318 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 CCL5P13501 91 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 CD40LGP29965 261 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 FEN1P39748 380 aaKnown RBP16.94■□□□□ 0.3
XRCC3-218ENST00000557439 EIF2B2P49770 351 aaKnown RBP16.94■□□□□ 0.3
XRCC3-218ENST00000557439 RAB15P59190 212 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 KLHL17Q6TDP4 642 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 CACUL1Q86Y37 369 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 FAM83FQ8NEG4 500 aaPredicted RBP16.94■□□□□ 0.3
XRCC3-218ENST00000557439 Q96MT0 163 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 OR5M11Q96RB7 305 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 CHCHD6Q9BRQ6 235 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 ITM2CQ9NQX7 267 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 ACER3Q9NUN7 267 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 DUSP12Q9UNI6 340 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 TMEM98Q9Y2Y6 226 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 MTCL1Q9Y4B5 1905 aaKnown RBP16.94■□□□□ 0.3
XRCC3-218ENST00000557439 TBX1O43435 398 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 MMP20O60882 483 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 GPR37L1O60883 481 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 LILRB5O75023 590 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 PPIBP23284 216 aaKnown RBP16.93■□□□□ 0.3
XRCC3-218ENST00000557439 GTF2E2P29084 291 aaKnown RBP16.93■□□□□ 0.3
XRCC3-218ENST00000557439 IRS1P35568 1242 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 RPS3AP61247 264 aaKnown RBP16.93■□□□□ 0.3
XRCC3-218ENST00000557439 ELP6Q0PNE2 266 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 OLIG3Q7RTU3 272 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 VN1R5Q7Z5H4 357 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 HMGN2P46Q86SG4 172 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 STX19Q8N4C7 294 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 RAB8BQ92930 207 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 ZFYVE19Q96K21 471 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 CXorf36Q9H7Y0 433 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 QPCTLQ9NXS2 382 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 CORO2BQ9UQ03 480 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 SNX11Q9Y5W9 270 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 ABHD14A-ACY1A0A1B0GW23 586 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 A0A1W2PRB8 838 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 TRBC2A0A5B9 178 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF197O14709 1029 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 DSCR3O14972 297 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 PTGER1P34995 402 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 CTSKP43235 329 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 EEF1A2Q05639 463 aaKnown RBP16.93■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF33BQ06732 778 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF77Q15935 545 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF658BQ4V348 819 aaPredicted RBP16.93■□□□□ 0.3
XRCC3-218ENST00000557439 FAM71E1Q6IPT2 247 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF605Q86T29 641 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 AQP11Q8NBQ7 271 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 SLC5A11Q8WWX8 675 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 UCN3Q969E3 161 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 NXPE3Q969Y0 559 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 VPS35Q96QK1 796 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 WFDC6Q9BQY6 131 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 TMEM165Q9HC07 324 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 SLAMF7Q9NQ25 335 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 IMPAD1Q9NX62 359 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 TAS2R9Q9NYW1 312 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 TAAR2Q9P1P5 351 aa16.93■□□□□ 0.3
XRCC3-218ENST00000557439 CLDN24A6NM45 220 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 GASTP01350 101 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 LINC00271P0C7V0 271 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 GABRB1P18505 474 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 MAGEA10P43363 369 aaPredicted RBP16.92■□□□□ 0.3
XRCC3-218ENST00000557439 ALDH9A1P49189 494 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 PTGES3Q15185 160 aaKnown RBP16.92■□□□□ 0.3
XRCC3-218ENST00000557439 PLEKHG7Q6ZR37 379 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 WDR53Q7Z5U6 358 aaPredicted RBP16.92■□□□□ 0.3
XRCC3-218ENST00000557439 B3GNT7Q8NFL0 401 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 OR5AR1Q8NGP9 310 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 HPS1Q92902 700 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 IL4I1Q96RQ9 567 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 BCL7BQ9BQE9 202 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF229Q9UJW7 825 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 A0A0G2JN53 185 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 SOX14O95416 240 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 LRRC74AQ0VAA2 488 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 FADDQ13158 208 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 COL9A2Q14055 689 aaPredicted RBP16.92■□□□□ 0.3
XRCC3-218ENST00000557439 ARMCX4Q5H9R4 360 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 LRRC56Q8IYG6 542 aaPredicted RBP16.92■□□□□ 0.3
XRCC3-218ENST00000557439 OR9A1PQ8NGU1 263 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 DTD2Q96FN9 168 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 SPATA9Q9BWV2 254 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 DOCK9Q9BZ29 2069 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 REV3LO60673 3130 aa16.92■□□□□ 0.3
XRCC3-218ENST00000557439 TSPAN11A1L157 253 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 POP7O75817 140 aaKnown RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 STATHP02808 62 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 PPM1AP35813 382 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 OPRD1P41143 372 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 GPR1P46091 355 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 LIM2P55344 173 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 PUM1Q14671 1186 aaKnown RBP eCLIP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF404Q494X3 552 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 ERAP2Q6P179 960 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms