RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ZCWPW2A0A1B0GU75 182 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 C4orf51C9J302 202 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 EIF3FO00303 357 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 GLSO94925 669 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 HAUS5O94927 633 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 IGHG3P01860 377 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 CELA3AP09093 270 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 HIST1H2AGP0C0S8 130 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 HIST1H2ADP20671 130 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 UQCRC1P31930 480 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 SOX3P41225 446 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 MAGEA5P43359 124 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 SCTRP47872 440 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 VPS41P49754 854 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 GPR143P51810 404 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 TIAL1Q01085 375 aaKnown RBP eCLIP8.38□□□□□ -1.072e-6■■□□□ 12.5
HNRNPC-227ENST00000556897 DHX9Q08211 1270 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 SP140Q13342 867 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 TERF2Q15554 542 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 TRIP13Q15645 432 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 SLC25A35Q3KQZ1 300 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 NDUFAF5Q5TEU4 345 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 HECTD2Q5U5R9 776 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 ANKRD22Q5VYY1 191 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 LRRC8EQ6NSJ5 796 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 IL20RBQ6UXL0 311 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 RGS9BPQ6ZS82 235 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 TRILQ7L0X0 811 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 CAND1Q86VP6 1230 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 CDC20BQ86Y33 519 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 PALM2Q8IXS6 379 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 CA13Q8N1Q1 262 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 FAM109AQ8N4B1 249 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 TBC1D19Q8N5T2 526 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 TMEM251Q8N6I4 163 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 WFDC11Q8NEX6 87 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 GOT1L1Q8NHS2 421 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 ASB15Q8WXK1 588 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 NEIL2Q969S2 332 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 HIST1H2AHQ96KK5 128 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 HIST1H2AJQ99878 128 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 BAG1Q99933 345 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 CCDC77Q9BR77 488 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 AARSD1Q9BTE6 412 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 H2AFJQ9BTM1 129 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 CNPPD1Q9BV87 410 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 KLHL31Q9H511 634 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 CLK4Q9HAZ1 481 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 C20orf96Q9NUD7 363 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 ARL15Q9NXU5 204 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 ALKBH4Q9NXW9 302 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 MYOTQ9UBF9 498 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 FBXO5Q9UKT4 447 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 ACAD8Q9UKU7 415 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 EDARQ9UNE0 448 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 PPIEQ9UNP9 301 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 COMMD10Q9Y6G5 202 aa8.38□□□□□ -1.07
HNRNPC-227ENST00000556897 CSPG4Q6UVK1 2322 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 EML6Q6ZMW3 1958 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 A0A1B0GVC2 190 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 ATP6AP2A0A1C7CYW4 349 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 SDR42E2A6NKP2 422 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 A6NNC1 897 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 WWP2O00308 870 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 AQP7O14520 342 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 WDR1O75083 606 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 ATP6AP2O75787 350 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 ZFAND5O76080 213 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 SMIM10L1P0DMW3 83 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 AHRP35869 848 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 RGS4P49798 205 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 SARNPP82979 210 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 SLC13A2Q13183 592 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 CSHL1Q14406 222 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 ZNF750Q32MQ0 723 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 C1orf185Q5T7R7 199 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 ARMC3Q5W041 872 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 DUPD1Q68J44 220 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 PAQR3Q6TCH7 311 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 BIVMQ86UB2 503 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 SCUBE1Q8IWY4 988 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 GPALPP1Q8IXQ4 340 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 MYO1HQ8N1T3 1032 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 TXLNBQ8N3L3 684 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 ANKRD53Q8N9V6 530 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 OR56A3Q8NH54 315 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 SLC5A11Q8WWX8 675 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 MBD6Q96DN6 1003 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 LINGO1Q96FE5 620 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 SMIM10Q96HG1 83 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 TSNARE1Q96NA8 513 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 RASL10BQ96S79 203 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 FAM173AQ9BQD7 235 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 AICDAQ9GZX7 198 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 IL1RL2Q9HB29 575 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 DMRT3Q9NQL9 472 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms