RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 ELK3P41970 407 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 SSR4P51571 173 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 PLA2G16P53816 162 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 PMPCAQ10713 525 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 SLBPQ14493 270 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHD8-211ENST00000556833 TESK1Q15569 626 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 ADNP2Q6IQ32 1131 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 FAM45BPQ6NSW5 357 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 ANKMY2Q8IV38 441 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 LRRC8AQ8IWT6 810 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 CNTN4Q8IWV2 1026 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 EID3Q8N140 333 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 POGLUT1Q8NBL1 392 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 TRPV3Q8NET8 790 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 OR5M3Q8NGP4 307 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 GABPB2Q8TAK5 448 aaPredicted RBP13.76□□□□□ -0.21
CHD8-211ENST00000556833 FAM45AQ8TCE6 357 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 GRK7Q8WTQ7 553 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 SEC16BQ96JE7 1060 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 FAR2Q96K12 515 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 CSF3RQ99062 836 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 CCDC77Q9BR77 488 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 WDR83Q9BRX9 315 aaKnown RBP13.76□□□□□ -0.21
CHD8-211ENST00000556833 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
CHD8-211ENST00000556833 VWA7Q9Y334 891 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 LIPGQ9Y5X9 500 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 PSAT1Q9Y617 370 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 NCKAP5O14513 1909 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 A8MVJ9 347 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 FANCGO15287 622 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 PIAS1O75925 651 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 TTC4O95801 387 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 IFNA16P05015 189 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 SMIM10L1P0DMW3 83 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 CERS1P27544 350 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 SOX3P41225 446 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 NUP107P57740 925 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 PPIAP62937 165 aaKnown RBP13.75□□□□□ -0.21
CHD8-211ENST00000556833 ID2Q02363 134 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 SNTB1Q13884 538 aaKnown RBP13.75□□□□□ -0.21
CHD8-211ENST00000556833 PPP1R3AQ16821 1122 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 ZNF750Q32MQ0 723 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 XKR6Q5GH73 641 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 FRA10AC1Q70Z53 315 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 STRA8Q7Z7C7 330 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 SLC35F6Q8N357 371 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 ZNF321PQ8N8H1 164 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 PSD4Q8NDX1 1056 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 ASB15Q8WXK1 588 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 VMP1Q96GC9 406 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 SMIM10Q96HG1 83 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 OSBPL9Q96SU4 736 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 TIMMDC1Q9NPL8 285 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 PNPLA3Q9NST1 481 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 HPF1Q9NWY4 346 aa13.75□□□□□ -0.21
CHD8-211ENST00000556833 MAP1AP78559 2803 aaPredicted RBP13.75□□□□□ -0.21
CHD8-211ENST00000556833 GOLGA6L10A0A0M3HER8 536 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 SH3BGRLO75368 114 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 TUBB4AP04350 444 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 SERPINA6P08185 405 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 ENO2P09104 434 aaPredicted RBP13.74□□□□□ -0.21
CHD8-211ENST00000556833 ZNF37AP17032 561 aaPredicted RBP13.74□□□□□ -0.21
CHD8-211ENST00000556833 CAPN3P20807 821 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 FNTAP49354 379 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 BMPR2Q13873 1038 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
CHD8-211ENST00000556833 EMC4Q5J8M3 183 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 NIPAL1Q6NVV3 410 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 ZNF585AQ6P3V2 769 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 CAPN12Q6ZSI9 719 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 KIAA0408Q6ZU52 694 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 SCUBE1Q8IWY4 988 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 KLHDC8AQ8IYD2 350 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 SPATA6LQ8N4H0 392 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 ZFP62Q8NB50 900 aaPredicted RBP13.74□□□□□ -0.21
CHD8-211ENST00000556833 OR2M7Q8NG81 312 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 OR10Q1Q8NGQ4 319 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 C16orf52Q8NHV5 167 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 ANKRD49Q8WVL7 239 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 RND1Q92730 232 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 GAL3ST3Q96A11 431 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 NAP1L3Q99457 506 aaPredicted RBP13.74□□□□□ -0.21
CHD8-211ENST00000556833 TP63Q9H3D4 680 aaPredicted RBP13.74□□□□□ -0.21
CHD8-211ENST00000556833 JRKLQ9Y4A0 524 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 MMACHCQ9Y4U1 282 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 KCNE2Q9Y6J6 123 aa13.74□□□□□ -0.21
CHD8-211ENST00000556833 FAM95CA0A1B0GW59 222 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 TMEM200CA6NKL6 621 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 CLGNO14967 610 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 B3GALT2O43825 422 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 TOXO94900 526 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 NADKO95544 446 aaPredicted RBP13.73□□□□□ -0.21
CHD8-211ENST00000556833 CHRNB4P30926 498 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 ART1P52961 327 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 RAB38P57729 211 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 STXBP1P61764 594 aaKnown RBP13.73□□□□□ -0.21
CHD8-211ENST00000556833 MYBPHQ13203 477 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 TMEM211Q6ICI0 200 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 ARHGAP11AQ6P4F7 1023 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 ACBD4Q8NC06 268 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms