RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 RUNX2Q13950 521 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 EFTUD2Q15029 972 aaKnown RBP eCLIP10.12□□□□□ -0.79
XRCC3-216ENST00000556682 TERF2Q15554 542 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 OR1C1Q15619 314 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 ADPRMQ3LIE5 342 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 TMEM35AQ53FP2 167 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 ZNF766Q5HY98 468 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 FCRLBQ6BAA4 426 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 ABHD17CQ6PCB6 329 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 TUBA3EQ6PEY2 450 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 CRLF3Q8IUI8 442 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 ZNF595Q8IYB9 648 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 FAM98AQ8NCA5 519 aaKnown RBP10.12□□□□□ -0.79
XRCC3-216ENST00000556682 KIF18AQ8NI77 898 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 ELP5Q8TE02 316 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 UBTD2Q8WUN7 234 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 NR4A3Q92570 626 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 FMO2Q99518 471 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 TBCDQ9BTW9 1192 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 DEFB126Q9BYW3 111 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 CDCP1Q9H5V8 836 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 SNX15Q9NRS6 342 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 NINJ2Q9NZG7 142 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 ERRFI1Q9UJM3 462 aaPredicted RBP10.12□□□□□ -0.79
XRCC3-216ENST00000556682 ZNF490Q9ULM2 529 aaPredicted RBP10.12□□□□□ -0.79
XRCC3-216ENST00000556682 OSGIN2Q9Y236 505 aa10.12□□□□□ -0.79
XRCC3-216ENST00000556682 TNPO3Q9Y5L0 923 aaKnown RBP10.12□□□□□ -0.79
XRCC3-216ENST00000556682 A0A1B0GUH1 482 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 GABRR3A8MPY1 467 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 A8MUA0 341 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 KRT38O76015 456 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 ACSL3O95573 720 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 RBP1P09455 135 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 PCNAP12004 261 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 EEF1DP29692 281 aaKnown RBP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 CD96P40200 585 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 PIK3CGP48736 1102 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 CYB561P49447 251 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 CLCN2P51788 898 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 ALDH18A1P54886 795 aaKnown RBP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 LIM2P55344 173 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 RBPJQ06330 500 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 PCDH1Q08174 1060 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 DLG1Q12959 904 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 PFKFB4Q16877 469 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 AP5B1Q2VPB7 878 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 C4orf17Q53FE4 359 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 LGSNQ5TDP6 509 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 LIPJQ5W064 366 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 ZNF324BQ6AW86 544 aaPredicted RBP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 METTL2BQ6P1Q9 378 aaKnown RBP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 MYLK4Q86YV6 388 aaPredicted RBP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 LAS2Q8IYD9 372 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 TMEM132CQ8N3T6 1108 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 TMEM178AQ8NBL3 297 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 B3GNT7Q8NFL0 401 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 KCTD4Q8WVF5 259 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 TMEM125Q96AQ2 219 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 REPS1Q96D71 796 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 CMTM7Q96FZ5 175 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 QRFPRQ96P65 431 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 F2RL3Q96RI0 385 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 TAAR6Q96RI8 345 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 FUT8Q9BYC5 575 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 AICDAQ9GZX7 198 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 LYRM4Q9HD34 91 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 NECTIN3Q9NQS3 549 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 PNO1Q9NRX1 252 aaKnown RBP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 PLEKHB1Q9UF11 243 aaPredicted RBP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 DMGDHQ9UI17 866 aaKnown RBP10.11□□□□□ -0.79
XRCC3-216ENST00000556682 TMCO1Q9UM00 188 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 DAPP1Q9UN19 280 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 PCDHGA11Q9Y5H2 935 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 CNTRLQ7Z7A1 2325 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 DOCK10Q96BY6 2186 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 SCN3AQ9NY46 2000 aa10.11□□□□□ -0.79
XRCC3-216ENST00000556682 SHANK1Q9Y566 2161 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 WIPF3A6NGB9 483 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 C4orf51C9J302 202 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 E2F3O00716 465 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 LRRTM2O43300 516 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 UGDHO60701 494 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 PRAMEF4O60810 478 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CTNSO60931 367 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 MYO1DO94832 1006 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 LDLRP01130 860 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 IFNA16P05015 189 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 MTHFD2P13995 350 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 EPORP19235 508 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CD22P20273 847 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CNTFP26441 200 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CERS1P27544 350 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 GMPRP36959 345 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 PIK3CBP42338 1070 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 IRF9Q00978 393 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 STX4Q12846 297 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 SERTAD2Q14140 314 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 E2F2Q14209 437 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 NAA30Q147X3 362 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms