RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 NOTCH4Q99466 2003 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 DOCK8Q8NF50 2099 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TRBV5-4A0A0C4DH59 114 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 A0A0D9SEW6 157 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 C1orf232A0A0U1RR37 186 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ISPDA4D126 451 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 OR51F1A6NGY5 319 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 AGAP14A8MT82 685 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF99A8MXY4 864 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ANHXE9PGG2 379 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 H3BMQ9 156 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 MANBAO00462 879 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ADAMDEC1O15204 470 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 COCHO43405 550 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 NARSO43776 548 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 NIPSNAP2O75323 286 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 CREG1O75629 220 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 STC2O76061 302 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 POP4O95707 220 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TSPAN12O95859 305 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TBX18O95935 607 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 MT-CO1P00395 513 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 PRLP01236 227 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 OCM2P0CE71 109 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 OCMP0CE72 109 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 CEBPBP17676 345 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TSPAN8P19075 237 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 FPR1P21462 350 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 CRHBPP24387 322 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 DDX6P26196 483 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 GABRR2P28476 465 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 HPCAL1P37235 193 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 CCR2P41597 374 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 PIK3CBP42338 1070 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ALDH9A1P49189 494 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 GPR15P49685 360 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 FOXA1P55317 472 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 RPL38P63173 70 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TIAL1Q01085 375 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 RBBP4Q09028 425 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ELP6Q0PNE2 266 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TRAF2Q12933 501 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 HTR4Q13639 388 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ARHGEF7Q14155 803 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 DUOXA1Q1HG43 343 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 FAM174BQ3ZCQ3 159 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 SPIN4Q56A73 249 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 RABL3Q5HYI8 236 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 PAGE2BQ5JRK9 111 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 PAGE3Q5JUK9 113 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 FAM78AQ5JUQ0 283 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 PRR31Q5SQ13 230 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 OTUD3Q5T2D3 398 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 GPRC6AQ5T6X5 926 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 GPR107Q5VW38 600 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 NADSYN1Q6IA69 706 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 NIPAL1Q6NVV3 410 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 CYHR1Q6ZMK1 362 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TPRG1Q6ZUI0 275 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 PIWIL3Q7Z3Z3 882 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TRIM69Q86WT6 500 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ANKRD13BQ86YJ7 626 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 P3H2Q8IVL5 708 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 RBM12BQ8IXT5 1001 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 YAF2Q8IY57 180 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 NXPE1Q8N323 547 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 AMER2Q8N7J2 671 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 KIAA1958Q8N8K9 716 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 OR7D4Q8NG98 312 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 OR7A2PQ8NGA2 310 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 SELENOMQ8WWX9 145 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 GTF2H4Q92759 462 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 NELL1Q92832 810 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 FGF14Q92915 247 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 SMARCD2Q92925 531 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ITFG2Q969R8 447 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 RHBDF1Q96CC6 855 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 SCRN2Q96FV2 425 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 VMP1Q96GC9 406 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TOE1Q96GM8 510 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF419Q96HQ0 510 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 PPM1MQ96MI6 270 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 COG8Q96MW5 612 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF583Q96ND8 569 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 MUS81Q96NY9 551 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 KXD1Q9BQD3 176 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 SLC39A3Q9BRY0 314 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 TRMT61BQ9BVS5 477 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 GABARAPL1Q9H0R8 117 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 SYNDIG1Q9H7V2 258 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 KAT8Q9H7Z6 458 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF556Q9HAH1 456 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF334Q9HCZ1 680 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 IL1RAPQ9NPH3 570 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 ABCB8Q9NUT2 735 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 THUMPD1Q9NXG2 353 aaKnown RBP5.88□□□□□ -1.47
CPSF2-205ENST00000556622 AHSPQ9NZD4 102 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 GPRC5BQ9NZH0 403 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 WNT16Q9UBV4 365 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 KLQ9UEF7 1012 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms