RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ADAD1Q96M93 576 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 CAMK1GQ96NX5 476 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 FCRL5Q96RD9 977 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 SEPT5Q99719 369 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 ZYG11BQ9C0D3 744 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 SLC7A5P2Q9GIP4 190 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CTDSP1Q9GZU7 261 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 ZNF350Q9GZX5 532 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 IL22Q9GZX6 179 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CXorf36Q9H7Y0 433 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 C10orf88Q9H8K7 445 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 SYTL2Q9HCH5 934 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 ENTPD7Q9NQZ7 604 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.95□□□□□ -1.62
SRP54-211ENST00000556445 TMEM248Q9NWD8 314 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 MARCH5Q9NX47 278 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 SPG21Q9NZD8 308 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CRNNQ9UBG3 495 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 HSPB7Q9UBY9 170 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 TBX21Q9UL17 535 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 SH2B3Q9UQQ2 575 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 MRPS17Q9Y2R5 130 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 NOSIPQ9Y314 301 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 VWA8A3KMH1 1905 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 NUP205Q92621 2012 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 IGLV3-10A0A075B6K4 115 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 A0A087WV48 116 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 LRRC72A6NJI9 287 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 FAM90A8PA6NJQ4 464 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 A6NL46 340 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 TARM1B6A8C7 271 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 F5H5T6 163 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 FAM72CH0Y354 149 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 DFFAO00273 331 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 COPEO14579 308 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 TO15178 435 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 CACNG3O60359 315 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 AVILO75366 819 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 KCNK5O95279 499 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 PRAMEF12O95522 483 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 JCHAINP01591 159 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 IGLV3-27P01718 113 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 GBAP04062 536 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 OR4Q2P0C623 313 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 ZDHHC11BP0C7U3 371 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 FAM90A13PP0C7W8 464 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 FAM90A24PP0C7X0 464 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 NDUFB7P17568 137 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 DNAJB1P25685 340 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 GCAP28676 217 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 ALDH3A1P30838 453 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 SPRP35270 261 aaPredicted RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 SLC18A2Q05940 514 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 TAF10Q12962 218 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 PPIGQ13427 754 aaKnown RBP eCLIP4.94□□□□□ -1.62
SRP54-211ENST00000556445 BTG3Q14201 252 aaPredicted RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 E2F2Q14209 437 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 PDK4Q16654 411 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 GSTA3Q16772 222 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 UGP2Q16851 508 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 PARP15Q460N3 678 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 AARS2Q5JTZ9 985 aaKnown RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 RABGAP1LQ5R372 815 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 RIPPLY2Q5TAB7 128 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 GRTP1Q5TC63 336 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 FAM72AQ5TYM5 149 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 TTC19Q6DKK2 380 aaPredicted RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 FAM72DQ6L9T8 149 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 NEK5Q6P3R8 708 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 ANKRD16Q6P6B7 361 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 TMEM81Q6P7N7 255 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 SLC46A3Q7Z3Q1 461 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 DEFB128Q7Z7B8 93 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 ITIH5Q86UX2 942 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 IQCHQ86VS3 1027 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 CHSY1Q86X52 802 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 FAM72BQ86X60 149 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 BANPQ8N9N5 519 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 ZNF461Q8TAF7 563 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 SUN3Q8TAQ9 357 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 RAB3IL1Q8TBN0 382 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 LRRC8CQ8TDW0 803 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 TOP1MTQ969P6 601 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 ZNF599Q96NL3 588 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 ZNF317Q96PQ6 595 aaPredicted RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 TGS1Q96RS0 853 aaKnown RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 IL12RB2Q99665 862 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 CPNE1Q99829 537 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 PRMT1Q99873 361 aaKnown RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 C11orf49Q9H6J7 331 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 WDR26Q9H7D7 661 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 ACTR5Q9H9F9 607 aaPredicted RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 NMUR1Q9HB89 426 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 MRM3Q9HC36 420 aaKnown RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 GLOD4Q9HC38 313 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 PRMT8Q9NR22 394 aaPredicted RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 CTNNAL1Q9UBT7 734 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 IPO11Q9UI26 975 aaKnown RBP4.94□□□□□ -1.62
SRP54-211ENST00000556445 VANGL2Q9ULK5 521 aa4.94□□□□□ -1.62
SRP54-211ENST00000556445 TET1Q8NFU7 2136 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms