RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ZNF385DQ9H6B1 395 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 REEP4Q9H6H4 257 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 PRDM9Q9NQV7 894 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 FBXO8Q9NRD0 319 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 STARD5Q9NSY2 213 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 GIMAP4Q9NUV9 329 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 NDE1Q9NXR1 346 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 CCDC167Q9P0B6 97 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 ARMCX1Q9P291 453 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 NDOR1Q9UHB4 597 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 BAIAP2L1Q9UHR4 511 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 CDV3Q9UKY7 258 aaKnown RBP8.75□□□□□ -1.01
ACTN1-218ENST00000556343 DLGAP4Q9Y2H0 992 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 NDUFAF1Q9Y375 327 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 MUC6Q6W4X9 2439 aa8.75□□□□□ -1.01
ACTN1-218ENST00000556343 UNC13CQ8NB66 2214 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 EP300Q09472 2414 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 A0A0A6YYD5 115 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 A0A0G2JN53 185 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 LOC100653049A0A140TA62 436 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 C1orf226A1L170 272 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 SYNDIG1LA6NDD5 238 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 RTCAO00442 366 aaKnown RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 NR5A2O00482 541 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 CLDN4O14493 209 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 SLC30A4O14863 429 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 DSCR3O14972 297 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 GALR3O60755 368 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 CSO75390 466 aaKnown RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 EEDO75530 441 aaKnown RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 KRT34O76011 436 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 KLHL18O94889 574 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 FTH1P19P0C7X4 201 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 JMJD7P0C870 316 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 FGF5P12034 268 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 COX4I1P13073 169 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 AGXTP21549 392 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 IL10P22301 178 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 PPP2R1BP30154 601 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 UFM1P61960 85 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 MXRA7P84157 204 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 KLC1Q07866 573 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 BIKQ13323 160 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 ISXQ2M1V0 245 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 PGS1Q32NB8 556 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 COQ5Q5HYK3 327 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 TMEM164Q5U3C3 297 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 CDCP2Q5VXM1 449 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 FAM71E1Q6IPT2 247 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 BLOC1S3Q6QNY0 202 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 C6orf89Q6UWU4 347 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 MSANTD1Q6ZTZ1 278 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 TTLL10Q6ZVT0 673 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF771Q7L3S4 317 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 TMPRSS9Q7Z410 1059 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 TMPRSS12Q86WS5 348 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 KIAA2013Q8IYS2 634 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 DSELQ8IZU8 1212 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 EFCAB3Q8N7B9 438 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 OR1L3Q8NH93 324 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 DNAJB8Q8NHS0 232 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 PROKR1Q8TCW9 393 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 COL26A1Q96A83 441 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 TESCQ96BS2 214 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 PPCDCQ96CD2 204 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 TM4SF18Q96CE8 201 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 SPDL1Q96EA4 605 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 MMABQ96EY8 250 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 LIN37Q96GY3 246 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 TEFMQ96QE5 360 aaKnown RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 YIPF2Q9BWQ6 316 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 ASPSCR1Q9BZE9 553 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 CLMPQ9H6B4 373 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 EFCAB1Q9HAE3 211 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 GID8Q9NWU2 228 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 SLC39A1Q9NY26 324 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 EHD3Q9NZN3 535 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 SH3BP4Q9P0V3 963 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 ATP6V1HQ9UI12 483 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 LEF1Q9UJU2 399 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 FBXW2Q9UKT8 454 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 PCDHGB4Q9UN71 923 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 NAALAD2Q9Y3Q0 740 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 COL5A1P20908 1838 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-218ENST00000556343 DNAH14Q0VDD8 3507 aa8.74□□□□□ -1.01
ACTN1-218ENST00000556343 ASXL3Q9C0F0 2248 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 CCDC187A0A096LP49 1063 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 A0A0A6YYC8 382 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 A0A1B0GX78 115 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 A0A1W2PP18 115 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 CAPN14A8MX76 684 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 I3L1I5 382 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 SCAMP2O15127 329 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF749O43361 778 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 PROM1O43490 865 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 AKAP10O43572 662 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 TBX19O60806 448 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms