RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 PSAT1Q9Y617 370 aa13.35□□□□□ -0.27
CHMP4BP1-201ENST00000556017 LRIT2A6NDA9 550 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 KLRC4-KLRK1H3BQV0 150 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 CYR61O00622 381 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 DNALI1O14645 258 aaPredicted RBP13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 CDC40O60508 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 GLSO94925 669 aaPredicted RBP13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 OR6B1O95007 311 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 WISP3O95389 354 aaPredicted RBP13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 TTC4O95801 387 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 ZNF37AP17032 561 aaPredicted RBP13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 GDF5P43026 501 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 SLC6A12P48065 614 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 SKP1P63208 163 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 ZNF460Q14592 562 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 ADPRMQ3LIE5 342 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 STEAP4Q687X5 459 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 RTL6Q6ICC9 239 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 SLCO4C1Q6ZQN7 724 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 ZNF321PQ8N8H1 164 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 PSD4Q8NDX1 1056 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 ANKRD49Q8WVL7 239 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 ATL1Q8WXF7 558 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 PBKQ96KB5 322 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 MCMBPQ9BTE3 642 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 DEFB127Q9H1M4 99 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 COQ3Q9NZJ6 369 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 FBXW2Q9UKT8 454 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 FAM215AQ9Y5M1 114 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 LIPGQ9Y5X9 500 aa13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 ANKHD1Q8IWZ3 2542 aaKnown RBP13.34□□□□□ -0.27
CHMP4BP1-201ENST00000556017 NPEPPSL1A6NEC2 478 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 FAM90A27PA6NNH2 459 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 OR2J2O76002 312 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 HOXD4P09016 255 aaPredicted RBP13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 CHRNB4P30926 498 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 SOX3P41225 446 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 FNTAP49354 379 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 DLX5P56178 289 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 BTN3A2P78410 334 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 PMPCAQ10713 525 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 RBBP5Q15291 538 aaKnown RBP13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 KRTAP21-3Q3LHN1 58 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 HP1BP3Q5SSJ5 553 aaPredicted RBP13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 ARHGAP11AQ6P4F7 1023 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 GPATCH11Q8N954 259 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 OR2M7Q8NG81 312 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 ASB5Q8WWX0 329 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 VMP1Q96GC9 406 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 CSF3RQ99062 836 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 AIF1LQ9BQI0 150 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 TP63Q9H3D4 680 aaPredicted RBP13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 PNO1Q9NRX1 252 aaKnown RBP13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 PNPLA3Q9NST1 481 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 CORO1CQ9ULV4 474 aaPredicted RBP13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 YARS2Q9Y2Z4 477 aaKnown RBP13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 JRKLQ9Y4A0 524 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 TEX264Q9Y6I9 313 aa13.33□□□□□ -0.28
CHMP4BP1-201ENST00000556017 FLNAP21333 2647 aaKnown RBP13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 NINQ8N4C6 2090 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 MYOCOSA0A1B0GUC4 107 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 PSMD12O00232 456 aaPredicted RBP13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 PGRMC1O00264 195 aaKnown RBP13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 IGHG3P01860 377 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 C1GALT1C1LP0DN25 315 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 ELK3P41970 407 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 SSR4P51571 173 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 HSD17B7P56937 341 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 RAB38P57729 211 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 CDKL1Q00532 357 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 FOXO1Q12778 655 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 BBS9Q3SYG4 887 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 GXYLT1Q4G148 440 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 TMEM211Q6ICI0 200 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 ZC3HC1Q86WB0 502 aaKnown RBP13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 LIX1LQ8IVB5 337 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 EID3Q8N140 333 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 TBC1D19Q8N5T2 526 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 TMEM156Q8N614 296 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 FAM47BQ8NA70 645 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 ACTRT1Q8TDG2 376 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 PTPMT1Q8WUK0 201 aaPredicted RBP13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 SREK1Q8WXA9 508 aaKnown RBP13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 RND1Q92730 232 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 SLCO2A1Q92959 643 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 GAL3ST3Q96A11 431 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 RHBDF1Q96CC6 855 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 POM121Q96HA1 1249 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 RASL10BQ96S79 203 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 OSBPL9Q96SU4 736 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 NAT9Q9BTE0 207 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 NPLQ9BXD5 320 aaPredicted RBP13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 TRIM54Q9BYV2 358 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 TTTY12Q9BZ98 90 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 ADAP2Q9NPF8 381 aa13.32□□□□□ -0.28
CHMP4BP1-201ENST00000556017 PRTFDC1Q9NRG1 225 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms