RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 NATD1Q8N6N6 113 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ACOT4Q8N9L9 421 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 VPS37AQ8NEZ2 397 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 OR1L3Q8NH93 324 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 MTERF3Q96E29 417 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 MMABQ96EY8 250 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF285Q96NJ3 590 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 TSSK3Q96PN8 268 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 TAAR9Q96RI9 348 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 TUBB6Q9BUF5 446 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 SLC25A23Q9BV35 468 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 DDA1Q9BW61 102 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 YIPF2Q9BWQ6 316 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ULBP3Q9BZM4 244 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 NMUR2Q9GZQ4 415 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 LYRM4Q9HD34 91 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 SDR39U1Q9NRG7 319 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 STARD5Q9NSY2 213 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 SIDT1Q9NXL6 827 aaKnown RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 GIMAP2Q9UG22 337 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 PISDQ9UG56 409 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 GPN3Q9UHW5 284 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 PSME2Q9UL46 239 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ENTPD4Q9Y227 616 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 PCDHB3Q9Y5E6 796 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 A0A0A6YYC8 382 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-220ENST00000555634 A0A0A6YYD5 115 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 C1orf226A1L170 272 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 PCNX2A6NKB5 2137 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 BBIP1A8MTZ0 92 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 I3L1I5 382 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-220ENST00000555634 AGRPO00253 132 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 RTCAO00442 366 aaKnown RBP10.62□□□□□ -0.71
SHMT2-220ENST00000555634 NR5A2O00482 541 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 CLDN4O14493 209 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF749O43361 778 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 RDH16O75452 317 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 IL6P05231 212 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 G6PDP11413 515 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 DRD2P14416 443 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 IL10P22301 178 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 CPN2P22792 545 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 NTSP30990 170 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 GABRA4P48169 554 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 PDX1P52945 283 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 DIO3P55073 304 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 TAS2R50P59544 299 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 MXRA7P84157 204 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 TNFRSF17Q02223 184 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 KLC1Q07866 573 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 ACTN3Q08043 901 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-220ENST00000555634 ABHD18Q0P651 414 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 HYAL2Q12891 473 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 PTGR1Q14914 329 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 RSPO4Q2I0M5 234 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-220ENST00000555634 C3orf38Q5JPI3 329 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 TMEM198Q66K66 360 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 OR52E8Q6IFG1 317 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 RHBDD2Q6NTF9 364 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 TRPM8Q7Z2W7 1104 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 CLNKQ7Z7G1 428 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 GPR180Q86V85 440 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 DSELQ8IZU8 1212 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 OR9A4Q8NGU2 314 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 ZFP28Q8NHY6 868 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 COL26A1Q96A83 441 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 PPCDCQ96CD2 204 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 FCRL1Q96LA6 429 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 MACROD1Q9BQ69 325 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 KLHL31Q9H511 634 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 RMND5AQ9H871 391 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 PRDM9Q9NQV7 894 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 ENAMQ9NRM1 1142 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 TOR4AQ9NXH8 423 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 CCDC167Q9P0B6 97 aa10.62□□□□□ -0.71
SHMT2-220ENST00000555634 COPG1Q9Y678 874 aaKnown RBP10.62□□□□□ -0.71
SHMT2-220ENST00000555634 KIF26BQ2KJY2 2108 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 CACNA1GO43497 2377 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 MYO15AQ9UKN7 3530 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 FAM234BA2RU67 622 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF860A6NHJ4 632 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 CCDC154A6NI56 674 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 SCAMP2O15127 329 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 CFLARO15519 480 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 HNRNPCL1O60812 293 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 KCNK5O95279 499 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 BMP10O95393 424 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 GBAP04062 536 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 IL3P08700 152 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 CD63P08962 238 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 ALDOCP09972 364 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 ITGAXP20702 1163 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 TPP2P29144 1249 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 RBMS1P29558 406 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 S100A3P33764 101 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 BSGP35613 385 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 KIR3DL1P43629 444 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 MRPL19P49406 292 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 NME5P56597 212 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 CLDN8P56748 225 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms