RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 OR2L5Q8NG80 312 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 ADAMTS18Q8TE60 1221 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 SCMH1Q96GD3 660 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 HES7Q9BYE0 225 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 CD244Q9BZW8 370 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 REXO4Q9GZR2 422 aaKnown RBP12.93□□□□□ -0.34
PCNX4-209ENST00000555569 KLHL1Q9NR64 748 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 PRTFDC1Q9NRG1 225 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 SEC14L3Q9UDX4 400 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 PCNX1Q96RV3 2341 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 GTF3C1Q12789 2109 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 SUPT3HB4E1H0 165 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 CLDN4O14493 209 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 CDK2AP1O14519 115 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 KERAO60938 352 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 SUPT3HO75486 399 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 UNC5CO95185 931 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 EPORP19235 508 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 TGM3Q08188 693 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 CHIT1Q13231 466 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 TBCCQ15814 346 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 C1QL3Q5VWW1 255 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 SPINK14Q6IE38 97 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 ADNP2Q6IQ32 1131 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 ABHD17CQ6PCB6 329 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 FJX1Q86VR8 437 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 SCUBE1Q8IWY4 988 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 FAM47BQ8NA70 645 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 TMEM178AQ8NBL3 297 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 UBTD2Q8WUN7 234 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 NXNL1Q96CM4 212 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 SERINC2Q96SA4 455 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 ATOH8Q96SQ7 321 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 LRRC1Q9BTT6 524 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 DEFB126Q9BYW3 111 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 COPS7BQ9H9Q2 264 aaPredicted RBP12.92□□□□□ -0.34
PCNX4-209ENST00000555569 IGSF5Q9NSI5 407 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 ZDHHC18Q9NUE0 388 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 MRPS33Q9Y291 106 aaKnown RBP12.92□□□□□ -0.34
PCNX4-209ENST00000555569 ASB1Q9Y576 335 aa12.92□□□□□ -0.34
PCNX4-209ENST00000555569 CENPEQ02224 2701 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 K7EPI3 171 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 UBXN8O00124 270 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 NEURL1O76050 574 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 URI1O94763 535 aaPredicted RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 SP1P08047 785 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 CERS1P27544 350 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 COL8A1P27658 744 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 TPP2P29144 1249 aaPredicted RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 EEF1DP29692 281 aaKnown RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 CASP2P42575 452 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 HNRNPFP52597 415 aaKnown RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 MTTPP55157 894 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 HSD17B7P56937 341 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 MLF1P58340 268 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 SLC13A2Q13183 592 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 E2F2Q14209 437 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 RCN2Q14257 317 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 TERF2Q15554 542 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 MROH9Q5TGP6 573 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 ZNF468Q5VIY5 522 aaPredicted RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 SLC25A25Q6KCM7 469 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 CCDC91Q7Z6B0 441 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 ZNF595Q8IYB9 648 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 TMEM52Q8NDY8 209 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 SRFBP1Q8NEF9 429 aaKnown RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 B3GNT7Q8NFL0 401 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 KCTD4Q8WVF5 259 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 RELTQ969Z4 430 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 MRRFQ96E11 262 aaKnown RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 C16orf45Q96MC5 204 aaPredicted RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 F2RL3Q96RI0 385 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 PNO1Q9NRX1 252 aaKnown RBP12.91□□□□□ -0.34
PCNX4-209ENST00000555569 LRFN1Q9P244 771 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 OPTCQ9UBM4 332 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 DAPP1Q9UN19 280 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 ACOT9Q9Y305 439 aa12.91□□□□□ -0.34
PCNX4-209ENST00000555569 A0A087X1B8 175 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 TRBV11-1A0A0K0K1C0 115 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 ASPDHA6ND91 283 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 SYCE1LA8MT33 242 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 TGFBR3LH3BV60 316 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 FCHO1O14526 889 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 ZG16O60844 167 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 MYO1DO94832 1006 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 MSH2P43246 934 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 CLCN2P51788 898 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 LIM2P55344 173 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 RBPJQ06330 500 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 ZRSR2Q15696 482 aaKnown RBP12.9□□□□□ -0.34
PCNX4-209ENST00000555569 UAP1Q16222 522 aaPredicted RBP12.9□□□□□ -0.34
PCNX4-209ENST00000555569 WHAMMP3Q1A5X7 153 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 FAM83EQ2M2I3 478 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 ZNF787Q6DD87 383 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 MED27Q6P2C8 311 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 GALNTL5Q7Z4T8 443 aa12.9□□□□□ -0.34
PCNX4-209ENST00000555569 CENPLQ8N0S6 344 aaPredicted RBP12.9□□□□□ -0.34
PCNX4-209ENST00000555569 FAM98AQ8NCA5 519 aaKnown RBP12.9□□□□□ -0.34
PCNX4-209ENST00000555569 APCDD1LQ8NCL9 501 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms