RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 QRFPRQ96P65 431 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 RTKNQ9BST9 563 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 CHRNA10Q9GZZ6 450 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 COPS7BQ9H9Q2 264 aaPredicted RBP9.68□□□□□ -0.86
SRP54-208ENST00000555557 IL1RL2Q9HB29 575 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 SCN3AQ9NY46 2000 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 SH3BP4Q9P0V3 963 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 SLAMF8Q9P0V8 285 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 C5AR2Q9P296 337 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 MAP10Q9P2G4 905 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 PDP2Q9P2J9 529 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ADAM29Q9UKF5 820 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ATG4BQ9Y4P1 393 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 GLOD5A6NK44 160 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 D6RAR5 112 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 MRASO14807 208 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ANGPT2O15123 496 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 SCAMP2O15127 329 aaKnown RBP9.68□□□□□ -0.86
SRP54-208ENST00000555557 GYG2O15488 501 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 FAM58BPP0C7Q3 252 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 LAMP1P11279 417 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 PTPN4P29074 926 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 CPOXP36551 454 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ASMTP46597 345 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ALDH9A1P49189 494 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 CLDN6P56747 220 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 TGM3Q08188 693 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ART3Q13508 389 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 RUNX2Q13950 521 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 SPIDRQ14159 915 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 TLR1Q15399 786 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 MANEAQ5SRI9 462 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 PHF19Q5T6S3 580 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ABHD13Q7L211 337 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ASRGL1Q7L266 308 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 GLB1L3Q8NCI6 653 aaPredicted RBP9.68□□□□□ -0.86
SRP54-208ENST00000555557 OR5T3Q8NGG3 340 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 OR9A4Q8NGU2 314 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 OR1L3Q8NH93 324 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ZNF285Q96NJ3 590 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 OR52E6Q96RD3 313 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 MAPKAP1Q9BPZ7 522 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 SLC39A3Q9BRY0 314 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 BTBD10Q9BSF8 475 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 NLNQ9BYT8 704 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 IRF2BPLQ9H1B7 796 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 EFCAB1Q9HAE3 211 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 MYNNQ9NPC7 610 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 NAALAD2Q9Y3Q0 740 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ASB4Q9Y574 426 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 A0A0A6YYC8 382 aaPredicted RBP9.67□□□□□ -0.86
SRP54-208ENST00000555557 A0A1W2PR48 441 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 HYKKA2RU49 373 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 H3BMH7 237 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 I3L1I5 382 aaPredicted RBP9.67□□□□□ -0.86
SRP54-208ENST00000555557 SGK494L7N484 410 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 TOX3O15405 576 aaPredicted RBP9.67□□□□□ -0.86
SRP54-208ENST00000555557 HYAL3O43820 417 aaPredicted RBP9.67□□□□□ -0.86
SRP54-208ENST00000555557 LRP3O75074 770 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 IL6P05231 212 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 GP1BAP07359 652 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 FURINP09958 794 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 ITGAXP20702 1163 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 S100A3P33764 101 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 MNAT1P51948 309 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 CLNS1AP54105 237 aaKnown RBP9.67□□□□□ -0.86
SRP54-208ENST00000555557 MTTPP55157 894 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 ZNF385BQ569K4 471 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 TMTC4Q5T4D3 741 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 NDUFAF5Q5TEU4 345 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 C18orf63Q68DL7 685 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 MRM1Q6IN84 353 aaKnown RBP9.67□□□□□ -0.86
SRP54-208ENST00000555557 KMT5CQ86Y97 462 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 TICAM1Q8IUC6 712 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 SLITRK4Q8IW52 837 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 FAM9CQ8IZT9 166 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 DSELQ8IZU8 1212 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 ZCCHC7Q8N3Z6 543 aaKnown RBP9.67□□□□□ -0.86
SRP54-208ENST00000555557 METTL27Q8N6F8 245 aaPredicted RBP9.67□□□□□ -0.86
SRP54-208ENST00000555557 EFCAB3Q8N7B9 438 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 TESCQ96BS2 214 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 C10orf90Q96M02 699 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 REEP4Q9H6H4 257 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 FGF21Q9NSA1 209 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.67□□□□□ -0.86
SRP54-208ENST00000555557 TMEM45AQ9NWC5 275 aa9.67□□□□□ -0.86
SRP54-208ENST00000555557 TXNDC9O14530 226 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 PGRMC2O15173 223 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CFLARO15519 480 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 FOXS1O43638 330 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 PRMT3O60678 531 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 GALR3O60755 368 aaPredicted RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 OR2B3O76000 313 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 DDCP20711 480 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 HPCAL1P37235 193 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 KIR3DL1P43629 444 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 TSFMP43897 325 aaKnown RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 RASSF2P50749 326 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 ARFIP1P53367 373 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 WNT3P56703 355 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms