RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TNFRSF4P43489 277 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 BRCC3P46736 316 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 BACE1P56817 501 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 ERVPABLB-1P60509 514 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 ALCAMQ13740 583 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 ABRAXAS2Q15018 415 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 GORABQ5T7V8 394 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 NEPROQ6NW34 567 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 KIR2DL5BQ8NHK3 375 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 PCNPQ8WW12 178 aaKnown RBP1.84□□□□□ -2.11
SRP54-207ENST00000555535 NTNG2Q96CW9 530 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 CFAP57Q96MR6 1250 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 ANKRD27Q96NW4 1050 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 SNX25Q9H3E2 840 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 SP140LQ9H930 580 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 ZNF446Q9NWS9 450 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 ABCG2Q9UNQ0 655 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 NSG2Q9Y328 171 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 TRPV2Q9Y5S1 764 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 MYL6BP14649 208 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 SULT2A1Q06520 285 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 CRMP1Q14194 572 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 FASTKQ14296 549 aaKnown RBP1.83□□□□□ -2.12
SRP54-207ENST00000555535 TGIF1Q15583 401 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 BMP2KLQ5H9B9 411 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 REP15Q6BDI9 236 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 TCEAL6Q6IPX3 200 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 MOXD1Q6UVY6 613 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 AMIGO1Q86WK6 493 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 TBC1D10CQ8IV04 446 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 CCDC71Q8IV32 467 aaPredicted RBP1.83□□□□□ -2.12
SRP54-207ENST00000555535 FBXO16Q8IX29 292 aaPredicted RBP1.83□□□□□ -2.12
SRP54-207ENST00000555535 ZNF781Q8N8C0 355 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 LIPHQ8WWY8 451 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 SKA1Q96BD8 255 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 ZBED6CLQ96FA7 236 aaPredicted RBP1.83□□□□□ -2.12
SRP54-207ENST00000555535 APOL6Q9BWW8 343 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 MRGBPQ9NV56 204 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 DBF4Q9UBU7 674 aaPredicted RBP1.83□□□□□ -2.12
SRP54-207ENST00000555535 GPR34Q9UPC5 381 aa1.83□□□□□ -2.12
SRP54-207ENST00000555535 CFAP65Q6ZU64 1925 aaKnown RBP1.83□□□□□ -2.12
SRP54-207ENST00000555535 TRAV18A0A075B6X5 111 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 TCF4P15884 667 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 EPORP19235 508 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 MDKP21741 143 aaPredicted RBP1.82□□□□□ -2.12
SRP54-207ENST00000555535 CSE1LP55060 971 aaKnown RBP1.82□□□□□ -2.12
SRP54-207ENST00000555535 CXCL6P80162 114 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 RBBP4Q09028 425 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 BECN1Q14457 450 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 KIAA0040Q15053 153 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 TAZQ16635 292 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 CELF3Q5SZQ8 465 aaKnown RBP1.82□□□□□ -2.12
SRP54-207ENST00000555535 KRT39Q6A163 491 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 ITPRIPL1Q6GPH6 555 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 TIFABQ6ZNK6 161 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 C15orf52Q6ZUT6 534 aaKnown RBP1.82□□□□□ -2.12
SRP54-207ENST00000555535 SLC22A18ASQ8N1D0 253 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 OR6F1Q8NGZ6 308 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 RNF138Q8WVD3 245 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 SMPDL3AQ92484 453 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 FRAT1Q92837 279 aaPredicted RBP1.82□□□□□ -2.12
SRP54-207ENST00000555535 FZD8Q9H461 694 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 C5orf66Q9H5L9 145 aa1.82□□□□□ -2.12
SRP54-207ENST00000555535 CHORDC1Q9UHD1 332 aaPredicted RBP1.82□□□□□ -2.12
SRP54-207ENST00000555535 HBS1LQ9Y450 684 aaKnown RBP1.82□□□□□ -2.12
SRP54-207ENST00000555535 CDC42BPBQ9Y5S2 1711 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 EPOPA6NHQ4 379 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 ZNF724A8MTY0 619 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 ZNF732B4DXR9 585 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 PRSS46E5RG02 174 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 PENKP01210 267 aaPredicted RBP1.81□□□□□ -2.12
SRP54-207ENST00000555535 DNTTP04053 509 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 EEF2P13639 858 aaKnown RBP1.81□□□□□ -2.12
SRP54-207ENST00000555535 SSTR1P30872 391 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 SLC1A6P48664 564 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 STX17P56962 302 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 PAX2Q02962 417 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 TLE4Q04727 773 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 IL10RBQ08334 325 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 TEFQ10587 303 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 CNTN1Q12860 1018 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 MAPK11Q15759 364 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 ARMC4Q5T2S8 1044 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 Q6P435 159 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 PLPPR4Q7Z2D5 763 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 NRARPQ7Z6K4 114 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 MFN1Q8IWA4 741 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 NME8Q8N427 588 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 CARNMT1Q8N4J0 409 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 TEX19Q8NA77 164 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 XXYLT1Q8NBI6 393 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 ZHX3Q9H4I2 956 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 C10orf88Q9H8K7 445 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 RCOR3Q9P2K3 495 aaPredicted RBP1.81□□□□□ -2.12
SRP54-207ENST00000555535 RPS6KA6Q9UK32 745 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 NCKAP1Q9Y2A7 1128 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 KLK4Q9Y5K2 254 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 SNX8Q9Y5X2 465 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 FAM169AQ9Y6X4 670 aa1.81□□□□□ -2.12
SRP54-207ENST00000555535 A0A1W2PPW3 197 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms