RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 C12orf43Q96C57 262 aaKnown RBP23.16■■□□□ 1.3
TMEM260-207ENST00000555497 DTNBP1Q96EV8 351 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 EPS8L2Q9H6S3 715 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 REEP1Q9H902 201 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 THUMPD1Q9NXG2 353 aaKnown RBP23.16■■□□□ 1.3
TMEM260-207ENST00000555497 C5AR2Q9P296 337 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 MSRAQ9UJ68 235 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 MOSPD1Q9UJG1 213 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 SNRNP200O75643 2136 aaKnown RBP23.16■■□□□ 1.3
TMEM260-207ENST00000555497 PRAMEF25A6NGN4 478 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 OR52A4PA6NMU1 304 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 DDCP20711 480 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 EPHA2P29317 976 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 SH3BGRP55822 239 aaPredicted RBP23.16■■□□□ 1.3
TMEM260-207ENST00000555497 BROXQ5VW32 411 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 GPR107Q5VW38 600 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 OR2A1Q8NGT9 310 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 CNIH3Q8TBE1 160 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 FBLIM1Q8WUP2 373 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 UCN3Q969E3 161 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 TIMM29Q9BSF4 260 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 AICDAQ9GZX7 198 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 NAA50Q9GZZ1 169 aaKnown RBP23.16■■□□□ 1.3
TMEM260-207ENST00000555497 FANCEQ9HB96 536 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 AASSQ9UDR5 926 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 ICKQ9UPZ9 632 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 MYO10Q9HD67 2058 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 PPM1DO15297 605 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 TMPRSS11DO60235 418 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 NTSR1P30989 418 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 RYKP34925 604 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 ADPRHP54922 357 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 ARHGAP22Q7Z5H3 698 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 FAM124AQ86V42 546 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 NRBF2Q96F24 287 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 TMEM38AQ9H6F2 299 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 NT5DC2Q9H857 520 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 NDUFAF4Q9P032 175 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 PADI2Q9Y2J8 665 aa23.15■■□□□ 1.3
TMEM260-207ENST00000555497 M0QX08 132 aa23.14■■□□□ 1.3
TMEM260-207ENST00000555497 CAPN5O15484 640 aaPredicted RBP23.14■■□□□ 1.3
TMEM260-207ENST00000555497 ABCB7O75027 752 aa23.14■■□□□ 1.3
TMEM260-207ENST00000555497 PRIM2P49643 509 aa23.14■■□□□ 1.3
TMEM260-207ENST00000555497 FADDQ13158 208 aa23.14■■□□□ 1.3
TMEM260-207ENST00000555497 SKIV2LQ15477 1246 aaKnown RBP23.14■■□□□ 1.3
TMEM260-207ENST00000555497 ZC3H7AQ8IWR0 971 aaKnown RBP23.14■■□□□ 1.3
TMEM260-207ENST00000555497 IL17RCQ8NAC3 791 aa23.14■■□□□ 1.3
TMEM260-207ENST00000555497 SPPL2AQ8TCT8 520 aa23.14■■□□□ 1.3
TMEM260-207ENST00000555497 TMEM184CQ9NVA4 438 aa23.14■■□□□ 1.3
TMEM260-207ENST00000555497 PAK1IP1Q9NWT1 392 aaPredicted RBP23.14■■□□□ 1.3
TMEM260-207ENST00000555497 GPSM3Q9Y4H4 160 aa23.14■■□□□ 1.3
TMEM260-207ENST00000555497 A0A1W2PQF6 199 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 TMX2-CTNND1H3BSU7 103 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 SLC31A1O15431 190 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 JUNBP17275 347 aaPredicted RBP23.14■■□□□ 1.29
TMEM260-207ENST00000555497 OR1E2P47887 323 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 ALDH9A1P49189 494 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 CDK6Q00534 326 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 CDK5R2Q13319 367 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 ADAM15Q13444 863 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 CYP27C1Q4G0S4 372 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 TRIM40Q6P9F5 258 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 SPARTQ8N0X7 666 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 GABRG3Q99928 467 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 APOOQ9BUR5 198 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 SNX8Q9Y5X2 465 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 AP1M2Q9Y6Q5 423 aa23.14■■□□□ 1.29
TMEM260-207ENST00000555497 A0A0G2JN53 185 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-207ENST00000555497 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-207ENST00000555497 SLC1A7O00341 560 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 DPM1O60762 260 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 DCKP27707 260 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 RRM2P31350 389 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 PPP2CBP62714 309 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 PPP2CAP67775 309 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 PRDX1Q06830 199 aaKnown RBP23.13■■□□□ 1.29
TMEM260-207ENST00000555497 RBBP4Q09028 425 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 IL18R1Q13478 541 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 LAIR1Q6GTX8 287 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 FAHD1Q6P587 224 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 DRAXINQ8NBI3 349 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-207ENST00000555497 PRDM8Q9NQV8 689 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 SNX11Q9Y5W9 270 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3DA0A087WVF3 549 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3IA0A087WXS9 549 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3EA0A087X179 549 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3KA0A087X1G2 549 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3FA6NER0 549 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3LB9A6J9 549 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 NDUFS4O43181 175 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 JRKO75564 520 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 ATE1O95260 518 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 EGFP01133 1207 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 C9P02748 559 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 STATHP02808 62 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 DNTTP04053 509 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3HP0C7X1 549 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 UQCRC2P22695 453 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 PKLRP30613 574 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms