RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ADAMTS4O75173 837 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZDHHC11BP0C7U3 371 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 PTPN5P54829 565 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 CXCR4P61073 352 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 SELENOWP63302 87 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 MTA1Q13330 715 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 CYB5D2Q8WUJ1 264 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 DIRAS2Q96HU8 199 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 SPNS1Q9H2V7 528 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 SP140LQ9H930 580 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 WDR87Q6ZQQ6 2873 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 GLTPD2A6NH11 291 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 CH25HO95992 272 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 CYP17A1P05093 508 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 CXCR2P25025 360 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 MAPK1P28482 360 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 HTR3AP46098 478 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 PRKAG1P54619 331 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 RNASE12Q5GAN4 147 aaKnown RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 TYW3Q6IPR3 259 aaKnown RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 RETSATQ6NUM9 610 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 AGTRAPQ6RW13 159 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 TMPRSS11AQ6ZMR5 421 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 OR7G3Q8NG95 312 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 WRAP53Q9BUR4 548 aaKnown RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 NMNAT1Q9HAN9 279 aaPredicted RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 TLX2O43763 284 aaPredicted RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 SERPINA4P29622 427 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 HNRNPFP52597 415 aaKnown RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 MLLT1Q03111 559 aaPredicted RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 HSPB3Q12988 150 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 HNRNPA0Q13151 305 aaKnown RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 SYNPOQ8N3V7 929 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 UCN3Q969E3 161 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 TESCQ96BS2 214 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 ARMC5Q96C12 935 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZNF334Q9HCZ1 680 aaPredicted RBP16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZDHHC3Q9NYG2 299 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 PLK4O00444 970 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 CCNB2O95067 398 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 BCHEP06276 602 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 HOXB9P17482 250 aaPredicted RBP16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 RAE1P78406 368 aaKnown RBP16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 SRSF11Q05519 484 aaKnown RBP16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 TBCEQ15813 527 aaPredicted RBP16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 IFI44LQ53G44 452 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 PYDC2Q56P42 97 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 SYCE2Q6PIF2 218 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 VPS37AQ8NEZ2 397 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 SCN2AQ99250 2005 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 C2orf49Q9BVC5 232 aaPredicted RBP16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 SMURF1Q9HCE7 757 aa16.33■□□□□ 0.21
PPP4R3A-208ENST00000555462 SCAMP2O15127 329 aaKnown RBP16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 SEPT4O43236 478 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 SEMA3DO95025 777 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 IDSP22304 550 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 RFX2P48378 723 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 PIN1Q13526 163 aaPredicted RBP16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 CLEC12AQ5QGZ9 265 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 C17orf99Q6UX52 265 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 MACC1Q6ZN28 852 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 MINDY2Q8NBR6 621 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 CSGALNACT1Q8TDX6 532 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 CHAC2Q8WUX2 184 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 C1GALT1C1Q96EU7 318 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 OR2A14Q96R47 310 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 MCCC1Q96RQ3 725 aaPredicted RBP16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 MACROD1Q9BQ69 325 aa16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 RIOK2Q9BVS4 552 aaKnown RBP16.33■□□□□ 0.2
PPP4R3A-208ENST00000555462 OR6C70A6NIJ9 312 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 GLOD5A6NK44 160 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 DNAJB5O75953 348 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 CYP2A7P20853 494 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 TUBA1BP68363 451 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 CDK6Q00534 326 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 MAP4K2Q12851 820 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 FADDQ13158 208 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 MICAQ29983 383 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 TUBA1AQ71U36 451 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 LILRB4Q8NHJ6 448 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 SLC29A3Q9BZD2 475 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 EXO1Q9UQ84 846 aaKnown RBP16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 PEX16Q9Y5Y5 336 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 SCN10AQ9Y5Y9 1956 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 MEIOCA2RUB1 952 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 AKR7A2O43488 359 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 HYAL3O43820 417 aaPredicted RBP16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 ATP1B2P14415 290 aaPredicted RBP16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 ACLYP53396 1101 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 CDC42P60953 191 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 SEC23BQ15437 767 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 CCDC58Q4VC31 144 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 ERAP2Q6P179 960 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 HSD11B1LQ7Z5J1 315 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 SLC12A9Q9BXP2 914 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 CLEC4AQ9UMR7 237 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 CACNA1IQ9P0X4 2223 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 SAGE2PA6NJ88 616 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 FRS3O43559 492 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 JUPP14923 745 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms