RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CSNK1G2P78368 415 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 FOXK2Q01167 660 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 SFT2D3Q587I9 215 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CLEC6AQ6EIG7 209 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 OR52E8Q6IFG1 317 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 FBXO42Q6P3S6 717 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 MIER2Q8N344 545 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 HIPK4Q8NE63 616 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 BHLHE22Q8NFJ8 381 aaPredicted RBP9.4□□□□□ -0.91
PSEN1-213ENST00000555386 ZNF483Q8TF39 744 aaPredicted RBP9.4□□□□□ -0.91
PSEN1-213ENST00000555386 FGF11Q92914 225 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 RERGQ96A58 199 aaPredicted RBP9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 ZFYVE21Q9BQ24 234 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 TWSG1Q9GZX9 223 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 SPNS1Q9H2V7 528 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 AKTIPQ9H8T0 292 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 SYNPO2LQ9H987 977 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 ADA2Q9NZK5 511 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CCDC167Q9P0B6 97 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 TMEM181Q9P2C4 612 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CD300AQ9UGN4 299 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 RIMS3Q9UJD0 308 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 RAB26Q9ULW5 256 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 DTNAQ9Y4J8 743 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 STMND1H3BQB6 276 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 K7EPI3 171 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 KLK10O43240 276 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 LCMT2O60294 686 aaKnown RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 KATNA1O75449 491 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 DXOO77932 396 aaKnown RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 FKBP9O95302 570 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 STAMBPO95630 424 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 ESRRBO95718 433 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 CHEK2O96017 543 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 UROSP10746 265 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 BCL6P41182 706 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 HNF4AP41235 474 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 ERFP50548 548 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 PCBP4P57723 403 aaKnown RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 ERVPABLB-1P60509 514 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 MRPS22P82650 360 aaKnown RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 MS4A2Q01362 244 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 SLC9A5Q14940 896 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 RBBP7Q16576 425 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 HKDC1Q2TB90 917 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 XKR6Q5GH73 641 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 LPCAT4Q643R3 524 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 ZNF425Q6IV72 752 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 FAM199XQ6PEV8 388 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 NXPE4Q6UWF7 544 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 TIPARPQ7Z3E1 657 aaKnown RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 VASH2Q86V25 355 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 TICAM1Q8IUC6 712 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 DTWD1Q8N5C7 304 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 IL22RA1Q8N6P7 574 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 GOLM1Q8NBJ4 401 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 ATP6V1E2Q96A05 226 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 NSUN5Q96P11 429 aaKnown RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 TEFMQ96QE5 360 aaKnown RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 ZPBPQ9BS86 351 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 NDC1Q9BTX1 674 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 SDR39U1Q9NRG7 319 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 TMEM184CQ9NVA4 438 aa9.39□□□□□ -0.91
PSEN1-213ENST00000555386 DHCR7Q9UBM7 475 aaKnown RBP9.39□□□□□ -0.91
PSEN1-213ENST00000555386 ZZEF1O43149 2961 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 LOC400499M0QZD8 3231 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 TCRBV3S1A0A5B6 114 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 PIP5K1BO14986 540 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 ZSCAN9O15535 394 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-213ENST00000555386 P2RX6O15547 441 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 RAD1O60671 282 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 SH3BGRLO75368 114 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 CRCPO75575 148 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 ALDOCP09972 364 aaKnown RBP9.38□□□□□ -0.91
PSEN1-213ENST00000555386 PRR35P0CG20 571 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 C1GALT1C1LP0DN25 315 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 EPB42P16452 691 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 GGT5P36269 586 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 EIF2S3P41091 472 aaKnown RBP9.38□□□□□ -0.91
PSEN1-213ENST00000555386 GABRA4P48169 554 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 AQP4P55087 323 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 CDH13P55290 713 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 RHDQ02161 417 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 IRF8Q02556 426 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 CHIT1Q13231 466 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 SRSF6Q13247 344 aaKnown RBP9.38□□□□□ -0.91
PSEN1-213ENST00000555386 GTF2H2Q13888 395 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 DOC2AQ14183 400 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 SLBPQ14493 270 aaKnown RBP eCLIP9.38□□□□□ -0.91
PSEN1-213ENST00000555386 GRAMD1BQ3KR37 738 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.38□□□□□ -0.91
PSEN1-213ENST00000555386 CDKL4Q5MAI5 379 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 GTF2H2CQ6P1K8 395 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 C6orf15Q6UXA7 325 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-213ENST00000555386 SLCO4C1Q6ZQN7 724 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 TTLL10Q6ZVT0 673 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 RNF44Q7L0R7 432 aa9.38□□□□□ -0.91
PSEN1-213ENST00000555386 LRRC70Q7Z2Q7 622 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms