RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SAP18O00422 153 aaKnown RBP11.39□□□□□ -0.59
SRP54-206ENST00000555317 SUV39H1O43463 412 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 SUPT7LO94864 414 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 PDGFAP04085 211 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 SERPINA7P05543 415 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 RPS17P08708 135 aaKnown RBP11.39□□□□□ -0.59
SRP54-206ENST00000555317 NUDT17P0C025 328 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 PRR35P0CG20 571 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 MYL2P10916 166 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 PTX3P26022 381 aaPredicted RBP11.39□□□□□ -0.59
SRP54-206ENST00000555317 CASRP41180 1078 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 RAB38P57729 211 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 RHAGQ02094 409 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 SLC13A2Q13183 592 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 PCOLCEQ15113 449 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 RASA2Q15283 850 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 ZRSR2Q15696 482 aaKnown RBP11.39□□□□□ -0.59
SRP54-206ENST00000555317 EXT1Q16394 746 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 BTBD16Q32M84 506 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 CCDC153Q494R4 210 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 SFT2D3Q587I9 215 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 C10orf62Q5T681 223 aaPredicted RBP11.39□□□□□ -0.59
SRP54-206ENST00000555317 JMJD6Q6NYC1 403 aaPredicted RBP11.39□□□□□ -0.59
SRP54-206ENST00000555317 QSOX2Q6ZRP7 698 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 MILR1Q7Z6M3 343 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 L3MBTL4Q8NA19 623 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 FAM47BQ8NA70 645 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 PLPP5Q8NEB5 264 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 OR52B6Q8NGF0 335 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 ZNF483Q8TF39 744 aaPredicted RBP11.39□□□□□ -0.59
SRP54-206ENST00000555317 MZB1Q8WU39 189 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 TSLPQ969D9 159 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 CCDC126Q96EE4 140 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 NSUN5Q96P11 429 aaKnown RBP11.39□□□□□ -0.59
SRP54-206ENST00000555317 CDK15Q96Q40 435 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 LPAR4Q99677 370 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 MESP1Q9BRJ9 268 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 NTMT1Q9BV86 223 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 MFRPQ9BY79 579 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 PARD6BQ9BYG5 372 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 AICDAQ9GZX7 198 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 OR51B5Q9H339 312 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 PRDM9Q9NQV7 894 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 TEKT2Q9UIF3 430 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 GRID1Q9ULK0 1009 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 TSC22D4Q9Y3Q8 395 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 MMACHCQ9Y4U1 282 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 BAHCC1Q9P281 2608 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 IGHV3-20A0A0C4DH32 117 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 CCDC151A5D8V7 595 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 SYNDIG1LA6NDD5 238 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 OR7A17O14581 309 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 MLYCDO95822 493 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 PLA2G2AP14555 144 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 KRT4P19013 534 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 MAOAP21397 527 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 HIST1H1TP22492 207 aaPredicted RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 TSFMP43897 325 aaKnown RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 LIM2P55344 173 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 RPS13P62277 151 aaKnown RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 CRB2Q5IJ48 1285 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 CFAP157Q5JU67 520 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 DEPDC1Q5TB30 811 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 FRG2Q64ET8 278 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 PAPD4Q6PIY7 484 aaKnown RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 ISLR2Q6UXK2 745 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 OR2W6PQ8NHA6 318 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 BRIX1Q8TDN6 353 aaKnown RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 TRPC4APQ8TEL6 797 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 QRFPRQ96P65 431 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 FRG2BQ96QU4 278 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 SERPINI1Q99574 410 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 ROPN1BQ9BZX4 212 aaPredicted RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 ILKAPQ9H0C8 392 aaPredicted RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 ZNF552Q9H707 407 aaPredicted RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 ROPN1Q9HAT0 212 aaPredicted RBP11.38□□□□□ -0.59
SRP54-206ENST00000555317 LYRM4Q9HD34 91 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 SLAMF7Q9NQ25 335 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 PRTFDC1Q9NRG1 225 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 PTGFRNQ9P2B2 879 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 SNX6Q9UNH7 406 aa11.38□□□□□ -0.59
SRP54-206ENST00000555317 DYTNA2CJ06 578 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 BLACEA4D250 179 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 TTLL8A6PVC2 850 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 FAM227AF5H4B4 570 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 J3QKU1 62 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 FOXE1O00358 373 aaPredicted RBP11.37□□□□□ -0.59
SRP54-206ENST00000555317 RTCAO00442 366 aaKnown RBP11.37□□□□□ -0.59
SRP54-206ENST00000555317 DLX3O60479 287 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 DNAJB6O75190 326 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 SBK3P0C264 359 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 IMPDH1P20839 514 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 CPN2P22792 545 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 ATP5A1P25705 553 aaKnown RBP11.37□□□□□ -0.59
SRP54-206ENST00000555317 TLX1P31314 330 aaPredicted RBP11.37□□□□□ -0.59
SRP54-206ENST00000555317 CRHR1P34998 444 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 PRKAA2P54646 552 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 CDH13P55290 713 aa11.37□□□□□ -0.59
SRP54-206ENST00000555317 HSD17B7P56937 341 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms