RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PRDM4Q9UKN5 801 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SCN2AQ99250 2005 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 LRIT2A6NDA9 550 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 PSMD12O00232 456 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 ERI3O43414 337 aaKnown RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 KLK8O60259 260 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 CDC123O75794 336 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 WFS1O76024 890 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 COL6A2P12110 1019 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 RNH1P13489 461 aaKnown RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 EPB42P16452 691 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 CD22P20273 847 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 HNRNPH1P31943 449 aaKnown RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 PIK3CGP48736 1102 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 ALDH18A1P54886 795 aaKnown RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 OLR1P78380 273 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 MFAP5Q13361 173 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 ABRAXAS2Q15018 415 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 NSDHLQ15738 373 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 TECRLQ5HYJ1 363 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 METTL2BQ6P1Q9 378 aaKnown RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 TRIM40Q6P9F5 258 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 QSOX2Q6ZRP7 698 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 Q6ZS92 163 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 VN1R5Q7Z5H4 357 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 ANKRD37Q7Z713 158 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 SRRM1Q8IYB3 904 aaKnown RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 CNPY4Q8N129 248 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 PLPP5Q8NEB5 264 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 OR2L5Q8NG80 312 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 BRIX1Q8TDN6 353 aaKnown RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 ADAMTS18Q8TE60 1221 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 MS4A6EQ96DS6 147 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 ZNF317Q96PQ6 595 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 NPLQ9BXD5 320 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 AICDAQ9GZX7 198 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 ZBTB20Q9HC78 741 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 TMCO1Q9UM00 188 aa12.3□□□□□ -0.44
SHMT2-211ENST00000554310 TNPO3Q9Y5L0 923 aaKnown RBP12.3□□□□□ -0.44
SHMT2-211ENST00000554310 HECTD1Q9ULT8 2610 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 TRIM49D1C9J1S8 452 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 SEC24DO94855 1032 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-211ENST00000554310 TBX6O95947 436 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-211ENST00000554310 B3GALT4O96024 378 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 RBP1P09455 135 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 CREB1P16220 341 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 DRD4P21917 467 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 BTN3A2P78410 334 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 TGM3Q08188 693 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 PCBP2Q15366 365 aaKnown RBP eCLIP12.29□□□□□ -0.44
SHMT2-211ENST00000554310 INPP5JQ15735 1006 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-211ENST00000554310 IGFBP7Q16270 282 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 EXT1Q16394 746 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 PFKFB4Q16877 469 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 LGSNQ5TDP6 509 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 PLAG1Q6DJT9 500 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 ADNP2Q6IQ32 1131 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 GRHL2Q6ISB3 625 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 SHISA5Q8N114 240 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 CA13Q8N1Q1 262 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 PSMF1Q92530 271 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 TSLPQ969D9 159 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 LMF1Q96S06 567 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 LPAR4Q99677 370 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 ROGDIQ9GZN7 287 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 REXO4Q9GZR2 422 aaKnown RBP12.29□□□□□ -0.44
SHMT2-211ENST00000554310 KCNK9Q9NPC2 374 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 NKIRAS1Q9NYS0 192 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 LUZP4Q9P127 313 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 CPSF2Q9P2I0 782 aaKnown RBP12.29□□□□□ -0.44
SHMT2-211ENST00000554310 ZNF490Q9ULM2 529 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-211ENST00000554310 ANGPTL3Q9Y5C1 460 aa12.29□□□□□ -0.44
SHMT2-211ENST00000554310 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
SHMT2-211ENST00000554310 IQANK1A0A1B0GTG1 560 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 SYNDIG1LA6NDD5 238 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 B3GALT2O43825 422 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 UGDHO60701 494 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 SNRPAP09012 282 aaKnown RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 KRT15P19012 456 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 MTTPP55157 894 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 TLR1Q15399 786 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 PLEKHN1Q494U1 663 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 SFT2D3Q587I9 215 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 B3GNTL1Q67FW5 361 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 MED27Q6P2C8 311 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 ABHD17CQ6PCB6 329 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 PAPD4Q6PIY7 484 aaKnown RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 LINC00696Q6ZRV3 163 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 LAS2Q8IYD9 372 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 PLD6Q8N2A8 252 aaKnown RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 TEX9Q8N6V9 391 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 GALNT11Q8NCW6 608 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 SRFBP1Q8NEF9 429 aaKnown RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 ARMC2Q8NEN0 867 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 MZB1Q8WU39 189 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 CKAP2Q8WWK9 683 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 MTBPQ96DY7 904 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 QRFPRQ96P65 431 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 SERINC2Q96SA4 455 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms