RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 C7orf57Q8NEG2 295 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 ADAMTS14Q8WXS8 1223 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 ERP27Q96DN0 273 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 DPH2Q9BQC3 489 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-210ENST00000553950 KLHL31Q9H511 634 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 ZNF385DQ9H6B1 395 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 ACTR5Q9H9F9 607 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-210ENST00000553950 MIEF1Q9NQG6 463 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 PRDM7Q9NQW5 492 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 ATAD3AQ9NVI7 634 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 SLC39A1Q9NY26 324 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 EHD3Q9NZN3 535 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 MRPS33Q9Y291 106 aaKnown RBP13.76□□□□□ -0.21
SHMT2-210ENST00000553950 NAALAD2Q9Y3Q0 740 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 GPR45Q9Y5Y3 372 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 SPTBP11277 2137 aa13.76□□□□□ -0.21
SHMT2-210ENST00000553950 PSMD12O00232 456 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-210ENST00000553950 PLD2O14939 933 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 CASC3O15234 703 aaKnown RBP13.75□□□□□ -0.21
SHMT2-210ENST00000553950 ZNF749O43361 778 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 HCRTR1O43613 425 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 SLC22A3O75751 556 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 KCNK5O95279 499 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 FAM58BPP0C7Q3 252 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 NR2F6P10588 404 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 DRD2P14416 443 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 IL10P22301 178 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 CERS1P27544 350 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 GCGRP47871 477 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 DIO3P55073 304 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 CLDN8P56748 225 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 RAE1P78406 368 aaKnown RBP13.75□□□□□ -0.21
SHMT2-210ENST00000553950 TNFRSF17Q02223 184 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 TRPM8Q7Z2W7 1104 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 UBE3DQ7Z6J8 389 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 CLNKQ7Z7G1 428 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 SLCO6A1Q86UG4 719 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 EFCAB3Q8N7B9 438 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 CDC26Q8NHZ8 85 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 TSPEARQ8WU66 669 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 TESCQ96BS2 214 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 MARK4Q96L34 752 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 LRFN5Q96NI6 719 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 MACROD1Q9BQ69 325 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 AICDAQ9GZX7 198 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 MYLK2Q9H1R3 596 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 LHX9Q9NQ69 397 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-210ENST00000553950 DLGAP4Q9Y2H0 992 aa13.75□□□□□ -0.21
SHMT2-210ENST00000553950 PTPRZ1P23471 2315 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-210ENST00000553950 C1orf226A1L170 272 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 BBIP1A8MTZ0 92 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 RTCAO00442 366 aaKnown RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 RRP9O43818 475 aaKnown RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 EEDO75530 441 aaKnown RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 RNH1P13489 461 aaKnown RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 FBLP22087 321 aaKnown RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 PRDX6P30041 224 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 PPP2R1BP30154 601 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 RAB38P57729 211 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 KCNK10P57789 538 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 LRRC74AQ0VAA2 488 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 SLAMF1Q13291 335 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 DSG2Q14126 1118 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 RSPO4Q2I0M5 234 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 MRM1Q6IN84 353 aaKnown RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 ZNF793Q6ZN11 406 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 MSANTD1Q6ZTZ1 278 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 TTLL10Q6ZVT0 673 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 GPR180Q86V85 440 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 SAMD14Q8IZD0 417 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 C16orf78Q8WTQ4 265 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 CLIP3Q96DZ5 547 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 CMTM5Q96DZ9 223 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 MMABQ96EY8 250 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 TSSK3Q96PN8 268 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 TAAR9Q96RI9 348 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 TUBB6Q9BUF5 446 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 SPRTNQ9H040 489 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-210ENST00000553950 STARD5Q9NSY2 213 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 OCIAD1Q9NX40 245 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 NDOR1Q9UHB4 597 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 DAPP1Q9UN19 280 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 PCDHGA8Q9Y5G5 932 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 PCDHGA3Q9Y5H0 932 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 FER1L5A0AVI2 2057 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 CROCCQ5TZA2 2017 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 CEP250Q9BV73 2442 aa13.74□□□□□ -0.21
SHMT2-210ENST00000553950 A0A0A6YYC8 382 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-210ENST00000553950 A0A0G2JN53 185 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 FAM234BA2RU67 622 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 C4orf51C9J302 202 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 I3L1I5 382 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-210ENST00000553950 EBAG9O00559 213 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 SCAMP2O15127 329 aaKnown RBP13.73□□□□□ -0.21
SHMT2-210ENST00000553950 TMPRSS11DO60235 418 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 TBX19O60806 448 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 RDH16O75452 317 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 IL6P05231 212 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 DDCP20711 480 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms