RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 GOLGA7Q7Z5G4 137 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 CUZD1Q86UP6 607 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 CNPY4Q8N129 248 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 TMEM151AQ8N4L1 468 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 HUS1BQ8NHY5 278 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 M1APQ8TC57 530 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 SNRNP40Q96DI7 357 aaKnown RBP9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 CMTM7Q96FZ5 175 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 CNDP1Q96KN2 507 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 QRFPRQ96P65 431 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 CCDC77Q9BR77 488 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 MS4A8Q9BY19 250 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 COPS7BQ9H9Q2 264 aaPredicted RBP9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 PRDM9Q9NQV7 894 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 STMN3Q9NZ72 180 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 TEKT2Q9UIF3 430 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 VPS4AQ9UN37 437 aa9.59□□□□□ -0.87
HNRNPC-208ENST00000553753 ASH1LQ9NR48 2969 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 IGKV3D-11A0A0A0MRZ8 115 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 TCRBV16S1A1N1A0A5B0 115 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 A8MUI8 341 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 H0YIV9 168 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 STX16-NPEPL1H3BU86 382 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CLDN4O14493 209 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 STX16O14662 325 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ZIC2O95409 532 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CERS1P27544 350 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 TNFRSF8P28908 595 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 PIK3CBP42338 1070 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 LIM2P55344 173 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ARG2P78540 354 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CPSF6Q16630 551 aaKnown RBP eCLIP9.58□□□□□ -0.883e-7■■■□□ 15.6
HNRNPC-208ENST00000553753 PRR30Q53SZ7 412 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 KHDRBS2Q5VWX1 349 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 B3GNTL1Q67FW5 361 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 UBE3DQ7Z6J8 389 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 LCA5Q86VQ0 697 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CISD2Q8N5K1 135 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CATSPER1Q8NEC5 780 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ARMC2Q8NEN0 867 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ADAMTS18Q8TE60 1221 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.58□□□□□ -0.883e-6■■■■■ 50.8
HNRNPC-208ENST00000553753 HAS2Q92819 552 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ATP6V1E2Q96A05 226 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 REPS1Q96D71 796 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 MTERF1Q99551 399 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 TBCDQ9BTW9 1192 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ROGDIQ9GZN7 287 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 NOL11Q9H8H0 719 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 MMP25Q9NPA2 562 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 NECTIN3Q9NQS3 549 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 MAP10Q9P2G4 905 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 PSMC3IPQ9P2W1 217 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 TBK1Q9UHD2 729 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 DAPP1Q9UN19 280 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 MRPS33Q9Y291 106 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 TSC22D4Q9Y3Q8 395 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 MMACHCQ9Y4U1 282 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 SHANK1Q9Y566 2161 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 OR7A17O14581 309 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 SH3BGRLO75368 114 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CLDN9O95484 217 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 SBK3P0C264 359 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 HIST1H1TP22492 207 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ARL1P40616 181 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 HSD17B7P56937 341 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 RAB38P57729 211 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 SLC26A5P58743 744 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ZNF33BQ06732 778 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 SLC13A2Q13183 592 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 DDX39BQ13838 428 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 RCN2Q14257 317 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ZNF169Q14929 603 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 AP5B1Q2VPB7 878 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 DEPDC1Q5TB30 811 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ABHD17BQ5VST6 288 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 H3F3CQ6NXT2 135 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ZNF595Q8IYB9 648 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CYP4X1Q8N118 509 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 ACOT4Q8N9L9 421 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 L3MBTL4Q8NA19 623 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 FAM47BQ8NA70 645 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 GALNT11Q8NCW6 608 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 OR52B6Q8NGF0 335 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 UBLCP1Q8WVY7 318 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 C19orf60Q96EN9 201 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 MAGEB10Q96LZ2 347 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CDK15Q96Q40 435 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 CENPKQ9BS16 269 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 NTMT1Q9BV86 223 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 OR51B5Q9H339 312 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 KCNK13Q9HB14 408 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 PLA2G3Q9NZ20 509 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 PCTPQ9UKL6 214 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 RNF11Q9Y3C5 154 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 PCDHGA10Q9Y5H3 936 aa9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 COPG1Q9Y678 874 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-208ENST00000553753 LRRK2Q5S007 2527 aa9.57□□□□□ -0.88
HNRNPC-208ENST00000553753 SAP18O00422 153 aaKnown RBP9.57□□□□□ -0.88
HNRNPC-208ENST00000553753 RTCAO00442 366 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms