RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RORAP35398 523 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 KRT6CP48668 564 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 EMX2Q04743 252 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 SLC34A1Q06495 639 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 KRT33BQ14525 404 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 WLSQ5T9L3 541 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 JMJD6Q6NYC1 403 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-209ENST00000553659 LETMD1Q6P1Q0 360 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 GK5Q6ZS86 529 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 MYLK4Q86YV6 388 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-209ENST00000553659 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.26■□□□□ 0.035e-8■■■■■ 204.6
ACTN1-209ENST00000553659 KLHDC8AQ8IYD2 350 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 FAM9CQ8IZT9 166 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 FBXO15Q8NCQ5 510 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-209ENST00000553659 FDCSPQ8NFU4 85 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 OR52B6Q8NGF0 335 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 SKA2Q8WVK7 121 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-209ENST00000553659 WDR60Q8WVS4 1066 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 DLG3Q92796 817 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 FBXL8Q96CD0 374 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 GID8Q9NWU2 228 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 CCDC167Q9P0B6 97 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 POMT2Q9UKY4 750 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 TIMM22Q9Y584 194 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 HEBP2Q9Y5Z4 205 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 ANKRD12Q6UB98 2062 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 FER1L5A0AVI2 2057 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 SLC5A10A0PJK1 596 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 ANGPT2O15123 496 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 SGTAO43765 313 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 PSIP1O75475 530 aaKnown RBP15.25■□□□□ 0.03
ACTN1-209ENST00000553659 CLDN9O95484 217 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 MSL3P1P0C860 447 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 ME2P23368 584 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 VARSP26640 1264 aaKnown RBP15.25■□□□□ 0.03
ACTN1-209ENST00000553659 PRDX3P30048 256 aaKnown RBP15.25■□□□□ 0.03
ACTN1-209ENST00000553659 SLC6A12P48065 614 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 KCNK10P57789 538 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 PSME3P61289 254 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 ABRQ12979 859 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 RCN1Q15293 331 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 MED25Q71SY5 747 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 CFAP206Q8IYR0 622 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 TMEM102Q8N9M5 508 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-209ENST00000553659 PPFIBP2Q8ND30 876 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 CLPTM1LQ96KA5 538 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 CCDC138Q96M89 665 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 SLAMF7Q9NQ25 335 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 ASIC5Q9NY37 505 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 FAM8A1Q9UBU6 413 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 TSR3Q9UJK0 312 aaKnown RBP15.25■□□□□ 0.03
ACTN1-209ENST00000553659 SNX6Q9UNH7 406 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 POMPQ9Y244 141 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 GPR45Q9Y5Y3 372 aa15.25■□□□□ 0.03
ACTN1-209ENST00000553659 SPENQ96T58 3664 aaKnown RBP15.25■□□□□ 0.03
ACTN1-209ENST00000553659 UTP20O75691 2785 aaKnown RBP15.24■□□□□ 0.03
ACTN1-209ENST00000553659 HIVEP3Q5T1R4 2406 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 SERTM1A2A2V5 107 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 TMEM150CB9EJG8 249 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 ULK1O75385 1050 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 ANP32DO95626 131 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 STAMBPO95630 424 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 DDAH2O95865 285 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 NPPAP01160 153 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 GNAZP19086 355 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 PREPP48147 710 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 ITGA1P56199 1179 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 PIGGQ5H8A4 983 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 SAMD4BQ5PRF9 694 aaKnown RBP15.24■□□□□ 0.03
ACTN1-209ENST00000553659 ZFP1Q6P2D0 407 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 PAOXQ6QHF9 649 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 TRIM46Q7Z4K8 759 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 SYTL1Q8IYJ3 562 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 SLC22A15Q8IZD6 547 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 Q8NA96 180 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 FNDC5Q8NAU1 212 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 OR1L3Q8NH93 324 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 NAT14Q8WUY8 206 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 PNPLA2Q96AD5 504 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 ESAMQ96AP7 390 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 CDRT15Q96T59 188 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 SMAD5Q99717 465 aaKnown RBP15.24■□□□□ 0.03
ACTN1-209ENST00000553659 NUDT9Q9BW91 350 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 VCX3BQ9H321 246 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 SRMSQ9H3Y6 488 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 SPAG4Q9NPE6 437 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 DNAJC11Q9NVH1 559 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 SERTAD3Q9UJW9 196 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 EIF3LQ9Y262 564 aaKnown RBP15.24■□□□□ 0.03
ACTN1-209ENST00000553659 ASB1Q9Y576 335 aa15.24■□□□□ 0.03
ACTN1-209ENST00000553659 PCSK5Q92824 1860 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 FAM234BA2RU67 622 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 GSAPA4D1B5 854 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 A6NL46 340 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 MAP3K7O43318 606 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 SLC22A3O75751 556 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 KRT36O76013 467 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 ACPPP15309 386 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 VHLP40337 213 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 PNLIPRP1P54315 467 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms