RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 HDAC8Q9BY41 377 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ZDHHC5Q9C0B5 715 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 OR52A5Q9H2C5 316 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 NT5DC2Q9H857 520 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ACOT13Q9NPJ3 140 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 GPATCH2Q9NW75 528 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 RAPGEFL1Q9UHV5 662 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 A0A1W2PRB8 838 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 CLDN25C9JDP6 229 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 TMX2-CTNND1H3BSU7 103 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 M0R3G1 203 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 DIRAS1O95057 198 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 TGFB1P01137 390 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ARAFP10398 606 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 CYP4B1P13584 511 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 CHI3L1P36222 383 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-205ENST00000553474 TAS2R50P59544 299 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 NTHL1P78549 312 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 EEF1A2Q05639 463 aaKnown RBP12.35□□□□□ -0.43
SHMT2-205ENST00000553474 SF1Q15637 639 aaKnown RBP12.35□□□□□ -0.43
SHMT2-205ENST00000553474 MICAQ29983 383 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 POM121L1PQ3SYA9 428 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ANGPTL8Q6UXH0 198 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 C11orf96Q7Z7L8 435 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 OR4C15Q8NGM1 316 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 CXorf40AQ8TE69 158 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 CHPT1Q8WUD6 406 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 MYDGFQ969H8 173 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 MAL2Q969L2 176 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF707Q96C28 371 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-205ENST00000553474 COX14Q96I36 57 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 COX4I2Q96KJ9 171 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 TMEM245Q9H330 911 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF556Q9HAH1 456 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 NEUROD4Q9HD90 331 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 MIEF1Q9NQG6 463 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 OBP2AQ9NY56 170 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 SPATA7Q9P0W8 599 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 CLEC1BQ9P126 229 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ERVK-18Q9QC07 812 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 SPASTQ9UBP0 616 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ASF1AQ9Y294 204 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 PCDHGA6Q9Y5G7 932 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 H3BQ06 376 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-205ENST00000553474 PCDHGA12O60330 932 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 MPZL2O60487 215 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 WBP4O75554 376 aaKnown RBP12.34□□□□□ -0.43
SHMT2-205ENST00000553474 C1QCP02747 245 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 ETFAP13804 333 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 CD6P30203 668 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 KRT20P35900 424 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 MAGEA8P43361 318 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 TUBA1BP68363 451 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 AQP6Q13520 282 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 HEPACAMQ14CZ8 416 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 SPCS2Q15005 226 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 LAPTM4AQ15012 233 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 TBCEQ15813 527 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-205ENST00000553474 FAM46CQ5VWP2 391 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 TUBA1AQ71U36 451 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 GALNT10Q86SR1 603 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 SLC9B2Q86UD5 537 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 AMZ2Q86W34 360 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 C12orf40Q86WS4 652 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 ENTHD1Q8IYW4 607 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF366Q8N895 744 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 OR10G2Q8NGC3 310 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 OR4K1Q8NGD4 311 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 FEVQ99581 238 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 AIF1LQ9BQI0 150 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 NLNQ9BYT8 704 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 OR51B5Q9H339 312 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 WASH6PQ9NQA3 447 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 FBXO8Q9NRD0 319 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 ERGIC3Q9Y282 383 aa12.34□□□□□ -0.43
SHMT2-205ENST00000553474 ANKDD1BA6NHY2 528 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 PRRT4C9JH25 899 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 K7ESM1 405 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 PDE9AO76083 593 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 ZBTB11O95625 1053 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 MT-ND2P03891 347 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 HLA-EP13747 358 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 RHCEP18577 417 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 DDCP20711 480 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 TEAD1P28347 426 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 KCNC4Q03721 635 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 PIGFQ07326 219 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 SLC5A12Q1EHB4 618 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 RGS21Q2M5E4 152 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 FBXO43Q4G163 708 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 DEPDC1Q5TB30 811 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 SYCE2Q6PIF2 218 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 TSEN54Q7Z6J9 526 aaKnown RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 ZNF554Q86TJ5 538 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 C17orf64Q86WR6 236 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 SLC15A4Q8N697 577 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 MINDY2Q8NBR6 621 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 OR5K2Q8NHB8 316 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 PHF10Q8WUB8 498 aaKnown RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 RASSF5Q8WWW0 418 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms