RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ANPEPP15144 967 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 SELEP16581 610 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 CYP3A5P20815 502 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 FEN1P39748 380 aaKnown RBP4.41□□□□□ -1.7
SYNE2-210ENST00000553455 SLC6A12P48065 614 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 CRIP2P52943 208 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-210ENST00000553455 BACE1P56817 501 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 GIT2Q14161 759 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 HLA-BQ31612 363 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 ZFP69Q49AA0 526 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 EPC2Q52LR7 807 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 LYPLAL1Q5VWZ2 237 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 TMEM64Q6YI46 380 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 FBXW8Q8N3Y1 598 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 URGCPQ8TCY9 931 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 GPR148Q8TDV2 347 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 CHURC1Q8WUH1 139 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 ZNF560Q96MR9 790 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 KRT12Q99456 494 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 SSX3Q99909 188 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 ASCL2Q99929 193 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 FAM213AQ9BRX8 229 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 PAPOLGQ9BWT3 736 aaKnown RBP4.41□□□□□ -1.7
SYNE2-210ENST00000553455 CARD9Q9H257 536 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 TMEM245Q9H330 911 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 SCRT2Q9NQ03 307 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 ANO10Q9NW15 660 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 SH3GLB1Q9Y371 365 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 GRID2O43424 1007 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 ZG16O60844 167 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 PRDM1O75626 825 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 NXPH2O95156 264 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 CPNE6O95741 557 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 EPOP01588 193 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 TSFMP43897 325 aaKnown RBP4.4□□□□□ -1.71
SYNE2-210ENST00000553455 HUNKP57058 714 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 EVCP57679 992 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 MFGE8Q08431 387 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-210ENST00000553455 DRP2Q13474 957 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 C3AR1Q16581 482 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 STX1AQ16623 288 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 CES4AQ5XG92 561 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 NLRP14Q86W24 1093 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 OR52E1Q8NGJ3 308 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 OR4A16Q8NH70 328 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 RPLP0P6Q8NHW5 317 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 UBTD2Q8WUN7 234 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 SLCO4A1Q96BD0 722 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 CNRIP1Q96F85 164 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-210ENST00000553455 SPXQ9BT56 116 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 DGCR6LQ9BY27 220 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 DPEP3Q9H4B8 488 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 MTHFD2LQ9H903 347 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-210ENST00000553455 VIPAS39Q9H9C1 493 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 C3orf14Q9HBI5 128 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 ZNF319Q9P2F9 582 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 TRIM10Q9UDY6 481 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 UBQLN2Q9UHD9 624 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 EXOC7Q9UPT5 735 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 ERVK-19Q9WJR5 959 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 UMODL1Q5DID0 1318 aa4.4□□□□□ -1.71
SYNE2-210ENST00000553455 TRBV2A0A0J9YWF9 115 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 SYCE3A1L190 88 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 RNF103O00237 685 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 FGF19O95750 216 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 ANGPTL1O95841 491 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 AHCYP23526 432 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 GIFP27352 417 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 CCR4P51679 360 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 GALK2Q01415 458 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 GABPAQ06546 454 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 PARP10Q53GL7 1025 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 SNRNP48Q6IEG0 339 aaKnown RBP4.39□□□□□ -1.71
SYNE2-210ENST00000553455 FRRS1Q6ZNA5 592 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 RFPL4BQ6ZWI9 263 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 CACUL1Q86Y37 369 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 ADAD2Q8NCV1 583 aaKnown RBP4.39□□□□□ -1.71
SYNE2-210ENST00000553455 OR5M9Q8NGP3 310 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 ZNF519Q8TB69 540 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 ATP8B4Q8TF62 1192 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 SLC13A3Q8WWT9 602 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 PRCCQ92733 491 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-210ENST00000553455 SLCO2A1Q92959 643 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 ERGIC2Q96RQ1 377 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 RUFY1Q96T51 708 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 NAP1L3Q99457 506 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-210ENST00000553455 S1PR3Q99500 378 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 TNMDQ9H2S6 317 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 SPHK2Q9NRA0 654 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 PIGVQ9NUD9 493 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 LNPEPQ9UIQ6 1025 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 RPH3AQ9Y2J0 694 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-210ENST00000553455 WIPI2Q9Y4P8 454 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 OR1A2Q9Y585 309 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 RNF123Q5XPI4 1314 aa4.39□□□□□ -1.71
SYNE2-210ENST00000553455 MYH15Q9Y2K3 1946 aa4.38□□□□□ -1.71
SYNE2-210ENST00000553455 IGHV3-20A0A0C4DH32 117 aa4.38□□□□□ -1.71
SYNE2-210ENST00000553455 A8MU76 341 aa4.38□□□□□ -1.71
SYNE2-210ENST00000553455 LINC01565O15544 149 aa4.38□□□□□ -1.71
SYNE2-210ENST00000553455 B4GAT1O43505 415 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms