RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 WDR53Q7Z5U6 358 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 SLC22A16Q86VW1 577 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 CDC20BQ86Y33 519 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 SCUBE1Q8IWY4 988 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 PALM2Q8IXS6 379 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 MYO1HQ8N1T3 1032 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 AGGF1Q8N302 714 aaeCLIP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 TMEM251Q8N6I4 163 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 TMEM52Q8NDY8 209 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 OR56A3Q8NH54 315 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 NEIL2Q969S2 332 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 LINGO1Q96FE5 620 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 SMIM10Q96HG1 83 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 ALPK1Q96QP1 1244 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 SMR3AQ99954 134 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 CCDC77Q9BR77 488 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 CNPPD1Q9BV87 410 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 RASSF1Q9NS23 344 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 C20orf96Q9NUD7 363 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 ARL15Q9NXU5 204 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 CRIM1Q9NZV1 1036 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 PPIEQ9UNP9 301 aaKnown RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 YARS2Q9Y2Z4 477 aaKnown RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 MMACHCQ9Y4U1 282 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 ACANP16112 2415 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 ANKHD1Q8IWZ3 2542 aaKnown RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 DNAJC13O75165 2243 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 AKAP6Q13023 2319 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-209ENST00000553308 A0A0G2JN53 185 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 A0A1B0GVC2 190 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 SDR42E2A6NKP2 422 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 GOLGA8MH3BSY2 632 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 WWP2O00308 870 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 ZFAND5O76080 213 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 HIST1H2AGP0C0S8 130 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-209ENST00000553308 FOSL1P15407 271 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 HIST1H2ADP20671 130 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 PTMSP20962 102 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 AHRP35869 848 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 KIR2DL3P43628 341 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 DNASE1L1P49184 302 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 DGKQP52824 942 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 PGGT1BP53609 377 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 CDKN2DP55273 166 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 SARNPP82979 210 aaKnown RBP8.42□□□□□ -1.06
SYNE2-209ENST00000553308 LTBQ06643 244 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 GPS1Q13098 491 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 RUNX2Q13950 521 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 CSHL1Q14406 222 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 ZNF750Q32MQ0 723 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 SLC25A35Q3KQZ1 300 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 HSP90AA5PQ58FG0 334 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 C1orf185Q5T7R7 199 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 NDUFAF5Q5TEU4 345 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 HECTD2Q5U5R9 776 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 UGT3A1Q6NUS8 523 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 RGS9BPQ6ZS82 235 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 GK5Q6ZS86 529 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 CLNKQ7Z7G1 428 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 TMPRSS11BQ86T26 416 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 GPALPP1Q8IXQ4 340 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 TXLNBQ8N3L3 684 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 FAM109AQ8N4B1 249 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 TBC1D19Q8N5T2 526 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 FAM47BQ8NA70 645 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 WFDC11Q8NEX6 87 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 CALML6Q8TD86 181 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 SLC5A11Q8WWX8 675 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 SCYL1Q96KG9 808 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 HIST1H2AHQ96KK5 128 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 RASL10BQ96S79 203 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 HIST1H2AJQ99878 128 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 FAM173AQ9BQD7 235 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 H2AFJQ9BTM1 129 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 CLK4Q9HAZ1 481 aaKnown RBP8.42□□□□□ -1.06
SYNE2-209ENST00000553308 DMRT3Q9NQL9 472 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 PRTFDC1Q9NRG1 225 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 IARS2Q9NSE4 1012 aaKnown RBP8.42□□□□□ -1.06
SYNE2-209ENST00000553308 MYOTQ9UBF9 498 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 GUCA1BQ9UMX6 200 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 ABCA4P78363 2273 aa8.42□□□□□ -1.06
SYNE2-209ENST00000553308 ZNF469Q96JG9 3925 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 MYOCOSA0A1B0GUC4 107 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ATP6AP2A0A1C7CYW4 349 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 URADA6NGE7 173 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 A6NNC1 897 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 AQP7O14520 342 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 NRDCO43847 1150 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ZNF354AO60765 605 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 WDR1O75083 606 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ATP6AP2O75787 350 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 GUCA1CO95843 209 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 FGGP02679 453 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 CCL3P10147 92 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 MLNP12872 115 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ENDOUP21128 410 aaKnown RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 CNR1P21554 472 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 UQCRC1P31930 480 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 MAN2A2P49641 1150 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms