RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 ZNF599Q96NL3 588 aa20.14■□□□□ 0.82
NPAS3-210ENST00000551492 ZNF768Q9H5H4 540 aaKnown RBP20.14■□□□□ 0.82
NPAS3-210ENST00000551492 INVSQ9Y283 1065 aa20.14■□□□□ 0.82
NPAS3-210ENST00000551492 PIKFYVEQ9Y2I7 2098 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 NME4O00746 187 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 SLC22A2O15244 555 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 SGCEO43556 437 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 THRBP10828 461 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 ARSFP54793 590 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 INO80DQ53TQ3 878 aaPredicted RBP20.14■□□□□ 0.81
NPAS3-210ENST00000551492 CLDN19Q8N6F1 224 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 NLGN4YQ8NFZ3 816 aaPredicted RBP20.14■□□□□ 0.81
NPAS3-210ENST00000551492 IPCEF1Q8WWN9 437 aaPredicted RBP20.14■□□□□ 0.81
NPAS3-210ENST00000551492 SCAMP4Q969E2 229 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 WRAP53Q9BUR4 548 aaKnown RBP20.14■□□□□ 0.81
NPAS3-210ENST00000551492 NIPAL2Q9H841 368 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 FAM50BQ9Y247 325 aa20.14■□□□□ 0.81
NPAS3-210ENST00000551492 C2CD4DB7Z1M9 353 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 PCDHGA12O60330 932 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 MRPS14O60783 128 aaKnown RBP20.13■□□□□ 0.81
NPAS3-210ENST00000551492 ADH1CP00326 375 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 GRK1Q15835 563 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 XKRXQ6PP77 449 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 ATRAIDQ6UW56 229 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 LNX2Q8N448 690 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 CDKN2AIPNLQ96HQ2 116 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 OMDQ99983 421 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 SARS2Q9NP81 518 aaKnown RBP20.13■□□□□ 0.81
NPAS3-210ENST00000551492 SLC6A14Q9UN76 642 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 LCKP06239 509 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 RRASP10301 218 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 FMO3P31513 532 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 POU3F4P49335 361 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 MADCAM1Q13477 382 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 CYB5R2Q6BCY4 276 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 SERPINA13PQ6UXR4 307 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 RPS27LQ71UM5 84 aaKnown RBP20.13■□□□□ 0.81
NPAS3-210ENST00000551492 MAMDC2Q7Z304 686 aaPredicted RBP20.13■□□□□ 0.81
NPAS3-210ENST00000551492 ELMO2Q96JJ3 720 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 KCNS3Q9BQ31 491 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 AMBRA1Q9C0C7 1298 aa20.13■□□□□ 0.81
NPAS3-210ENST00000551492 MBD1Q9UIS9 605 aaPredicted RBP20.13■□□□□ 0.81
NPAS3-210ENST00000551492 SRP72O76094 671 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 RPS5P46782 204 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 RPL14P50914 215 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 SLC16A13Q7RTY0 426 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 ETFBKMTQ8IXQ9 262 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 HS3ST5Q8IZT8 346 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 KCT2Q8NC54 265 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 CLHC1Q8NHS4 586 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 Q96MT0 163 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 TRMT61BQ9BVS5 477 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 GDE1Q9NZC3 331 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 ANGPT2O15123 496 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 IGSF6O95976 241 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 LDLRP01130 860 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 LHCGRP22888 699 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 PPP1R8Q12972 351 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 ZNF234Q14588 700 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 USP10Q14694 798 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 TCEA2Q15560 299 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 ANKRD39Q53RE8 183 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 ARL13AQ5H913 290 aaPredicted RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 TXNDC5Q8NBS9 432 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 TBCDQ9BTW9 1192 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 BOCQ9BWV1 1114 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 PRDM9Q9NQV7 894 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 DZANK1Q9NVP4 752 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 MGAT4BQ9UQ53 548 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 KCNMB2Q9Y691 235 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 LOC100506127A0A0U1RQW1 187 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 B4DXG7 233 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 STX7O15400 261 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 SNAPINO95295 136 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 EPHX1P07099 455 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 TGFBR2P37173 567 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 CLCNKAP51800 687 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 GABARAPL2P60520 117 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 HERVK_113P63132 956 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 FGFBP1Q14512 234 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 HKDC1Q2TB90 917 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 CARD16Q5EG05 197 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 ZDHHC13Q8IUH4 622 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 GANCQ8TET4 914 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 SLC30A3Q99726 388 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 C19orf43Q9BQ61 176 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 DPCDQ9BVM2 203 aaPredicted RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 INTS10Q9NVR2 710 aaKnown RBP20.12■□□□□ 0.81
NPAS3-210ENST00000551492 FAM118AQ9NWS6 357 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 ERVK-19Q9WJR5 959 aa20.12■□□□□ 0.81
NPAS3-210ENST00000551492 LGALS8O00214 317 aa20.11■□□□□ 0.81
NPAS3-210ENST00000551492 CBX7O95931 251 aa20.11■□□□□ 0.81
NPAS3-210ENST00000551492 SNRPD1P62314 119 aaKnown RBP20.11■□□□□ 0.81
NPAS3-210ENST00000551492 PUDPQ08623 228 aa20.11■□□□□ 0.81
NPAS3-210ENST00000551492 CAPRIN1Q14444 709 aaKnown RBP20.11■□□□□ 0.81
NPAS3-210ENST00000551492 CHMP1BQ7LBR1 199 aa20.11■□□□□ 0.81
NPAS3-210ENST00000551492 HDDC2Q7Z4H3 204 aa20.11■□□□□ 0.81
NPAS3-210ENST00000551492 DMRTC2Q8IXT2 367 aaPredicted RBP20.11■□□□□ 0.81
NPAS3-210ENST00000551492 CHPFQ8IZ52 775 aa20.11■□□□□ 0.81
NPAS3-210ENST00000551492 PELI3Q8N2H9 469 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms