RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 EFTUD2Q15029 972 aaKnown RBP eCLIP18.27■□□□□ 0.52
ATF1-202ENST00000549612 ZRSR2Q15696 482 aaKnown RBP18.27■□□□□ 0.52
ATF1-202ENST00000549612 PAGE2BQ5JRK9 111 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 C1QL3Q5VWW1 255 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 SPINK14Q6IE38 97 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 ADNP2Q6IQ32 1131 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 TRIM40Q6P9F5 258 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 ABHD17CQ6PCB6 329 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 RAPH1Q70E73 1250 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 TBC1D1Q86TI0 1168 aaPredicted RBP18.27■□□□□ 0.52
ATF1-202ENST00000549612 FJX1Q86VR8 437 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 HORMAD2Q8N7B1 307 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 APCDD1LQ8NCL9 501 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 UBTD2Q8WUN7 234 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 EXT2Q93063 718 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 ATOH8Q96SQ7 321 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 HES7Q9BYE0 225 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 CD244Q9BZW8 370 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 KLHL1Q9NR64 748 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 IGSF5Q9NSI5 407 aa18.27■□□□□ 0.52
ATF1-202ENST00000549612 PPIEQ9UNP9 301 aaKnown RBP18.27■□□□□ 0.52
ATF1-202ENST00000549612 ESYT3A0FGR9 886 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 KERAO60938 352 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 LTA4HP09960 611 aaKnown RBP18.26■□□□□ 0.51
ATF1-202ENST00000549612 COL8A1P27658 744 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 TPP2P29144 1249 aaPredicted RBP18.26■□□□□ 0.51
ATF1-202ENST00000549612 EEF1DP29692 281 aaKnown RBP18.26■□□□□ 0.51
ATF1-202ENST00000549612 ST13P50502 369 aaKnown RBP18.26■□□□□ 0.51
ATF1-202ENST00000549612 OC90Q02509 493 aaPredicted RBP18.26■□□□□ 0.51
ATF1-202ENST00000549612 SRSF11Q05519 484 aaKnown RBP18.26■□□□□ 0.51
ATF1-202ENST00000549612 PCDH1Q08174 1060 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 CHIT1Q13231 466 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.26■□□□□ 0.51
ATF1-202ENST00000549612 C8orf74Q6P047 294 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 TMEM178AQ8NBL3 297 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 TMEM52Q8NDY8 209 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 SERINC2Q96SA4 455 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 TRIM45Q9H8W5 580 aaPredicted RBP18.26■□□□□ 0.51
ATF1-202ENST00000549612 ZDHHC18Q9NUE0 388 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 LRFN1Q9P244 771 aa18.26■□□□□ 0.51
ATF1-202ENST00000549612 MRPS33Q9Y291 106 aaKnown RBP18.26■□□□□ 0.51
ATF1-202ENST00000549612 CROCCQ5TZA2 2017 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 A8MUA0 341 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 TGFBR3LH3BV60 316 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 CLDN4O14493 209 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 ZG16O60844 167 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 SP1P08047 785 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 TRHRP34981 398 aaPredicted RBP18.25■□□□□ 0.51
ATF1-202ENST00000549612 DCTP40126 519 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 HNRNPFP52597 415 aaKnown RBP18.25■□□□□ 0.51
ATF1-202ENST00000549612 MTTPP55157 894 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 SLC7A5Q01650 507 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 IRF8Q02556 426 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 TGM3Q08188 693 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 HIST2H2ACQ16777 129 aaPredicted RBP18.25■□□□□ 0.51
ATF1-202ENST00000549612 ZNF468Q5VIY5 522 aaPredicted RBP18.25■□□□□ 0.51
ATF1-202ENST00000549612 HIST2H2AA3Q6FI13 130 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 CCDC91Q7Z6B0 441 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 ZNF595Q8IYB9 648 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 B3GNT7Q8NFL0 401 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 FRMD6Q96NE9 622 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 PRTFDC1Q9NRG1 225 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 DAPP1Q9UN19 280 aa18.25■□□□□ 0.51
ATF1-202ENST00000549612 CCDC189A1A4V9 331 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 SYNDIG1LA6NDD5 238 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 SUPT3HB4E1H0 165 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 UBXN8O00124 270 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 CYR61O00622 381 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 SUPT3HO75486 399 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 SLC25A12O75746 678 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 MYO1DO94832 1006 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 CERS1P27544 350 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 LIM2P55344 173 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 RBPJQ06330 500 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 ZNF787Q6DD87 383 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 SLC25A25Q6KCM7 469 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 GALNTL5Q7Z4T8 443 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 ZNF227Q86WZ6 799 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 CENPLQ8N0S6 344 aaPredicted RBP18.24■□□□□ 0.51
ATF1-202ENST00000549612 FAM47BQ8NA70 645 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 RHEBL1Q8TAI7 183 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 THAP3Q8WTV1 239 aaPredicted RBP18.24■□□□□ 0.51
ATF1-202ENST00000549612 UBE2E3Q969T4 207 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 KCNC2Q96PR1 638 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 F2RL3Q96RI0 385 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 CSF3RQ99062 836 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 LRRC1Q9BTT6 524 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 DEFB126Q9BYW3 111 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 ROGDIQ9GZN7 287 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 COPS7BQ9H9Q2 264 aaPredicted RBP18.24■□□□□ 0.51
ATF1-202ENST00000549612 PRDM7Q9NQW5 492 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 ACOT9Q9Y305 439 aa18.24■□□□□ 0.51
ATF1-202ENST00000549612 A0A087X1B8 175 aa18.23■□□□□ 0.51
ATF1-202ENST00000549612 HMX2A2RU54 273 aa18.23■□□□□ 0.51
ATF1-202ENST00000549612 K7EPI3 171 aa18.23■□□□□ 0.51
ATF1-202ENST00000549612 FCHO1O14526 889 aa18.23■□□□□ 0.51
ATF1-202ENST00000549612 NME2P1O60361 137 aa18.23■□□□□ 0.51
ATF1-202ENST00000549612 WISP2O76076 250 aa18.23■□□□□ 0.51
ATF1-202ENST00000549612 MTHFD2P13995 350 aa18.23■□□□□ 0.51
ATF1-202ENST00000549612 NME2P22392 152 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms