RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 NDC1Q9BTX1 674 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 LYARQ9NX58 379 aaKnown RBP27.27■■□□□ 1.96
BRF1-213ENST00000548421 MAPRE3Q9UPY8 281 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 KIF26BQ2KJY2 2108 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 CSO75390 466 aaKnown RBP27.26■■□□□ 1.95
BRF1-213ENST00000548421 LRATO95237 230 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 PRPS1L1P21108 318 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 CLNS1AP54105 237 aaKnown RBP27.26■■□□□ 1.95
BRF1-213ENST00000548421 ARSFP54793 590 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 CLDN6P56747 220 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 C21orf58P58505 322 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 IL11RAQ14626 422 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 KRT72Q14CN4 511 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 FOXR1Q6PIV2 292 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 KRTCAP2Q8N6L1 136 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 GLB1L3Q8NCI6 653 aaPredicted RBP27.26■■□□□ 1.95
BRF1-213ENST00000548421 STARD8Q92502 1023 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 TM4SF18Q96CE8 201 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 ZBTB18Q99592 522 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 CLCA2Q9UQC9 943 aa27.26■■□□□ 1.95
BRF1-213ENST00000548421 ZNF749O43361 778 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 FOXS1O43638 330 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 GUCY1B2O75343 617 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 NSA2O95478 260 aaKnown RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 HPCAL1P37235 193 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 MC2RQ01718 297 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 MAPRE2Q15555 327 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 FAM71E1Q6IPT2 247 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 PPP1R3BQ86XI6 285 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 FUNDC1Q8IVP5 155 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 RIMKLAQ8IXN7 391 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 OR9A4Q8NGU2 314 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 GFM2Q969S9 779 aaKnown RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 LIN37Q96GY3 246 aaPredicted RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 SRPK3Q9UPE1 567 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 ASB4Q9Y574 426 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 PTPRZ1P23471 2315 aaPredicted RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 A0A0A6YYC8 382 aaPredicted RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 FAM234BA2RU67 622 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 ZNF860A6NHJ4 632 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 I3L1I5 382 aaPredicted RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 SGK494L7N484 410 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 IL3P08700 152 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 FGF5P12034 268 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 IL12AP29459 219 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 AVPR1BP47901 424 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 KLC1Q07866 573 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 COL9A2Q14055 689 aaPredicted RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 GK5Q6ZS86 529 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 TTLL10Q6ZVT0 673 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 MVB12AQ96EY5 273 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 NPLQ9BXD5 320 aaPredicted RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 CLMPQ9H6B4 373 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 FBXO8Q9NRD0 319 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 CDV3Q9UKY7 258 aaKnown RBP27.25■■□□□ 1.95
BRF1-213ENST00000548421 LOXL2Q9Y4K0 774 aa27.25■■□□□ 1.95
BRF1-213ENST00000548421 B4E171 279 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 POLR1CO15160 346 aaPredicted RBP27.24■■□□□ 1.95
BRF1-213ENST00000548421 AKAP10O43572 662 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 UBOX5O94941 541 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 PRDX6P30041 224 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 TSPAN7P41732 249 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 NOVA1P51513 510 aaKnown RBP27.24■■□□□ 1.95
BRF1-213ENST00000548421 POLR2JP52435 117 aaKnown RBP27.24■■□□□ 1.95
BRF1-213ENST00000548421 HNRNPH2P55795 449 aaKnown RBP27.24■■□□□ 1.95
BRF1-213ENST00000548421 C2orf80Q0P641 193 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 RCAN2Q14206 197 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 HEPACAMQ14CZ8 416 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 PRAMEF17Q5VTA0 474 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 BLOC1S3Q6QNY0 202 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 GPR180Q86V85 440 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 TMEM126BQ8IUX1 230 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 TESCQ96BS2 214 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 CMTM5Q96DZ9 223 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 LYRM4Q9HD34 91 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 APMAPQ9HDC9 416 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 TEX10Q9NXF1 929 aaPredicted RBP27.24■■□□□ 1.95
BRF1-213ENST00000548421 PHF11Q9UIL8 331 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 FBXW2Q9UKT8 454 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 CEP250Q9BV73 2442 aa27.24■■□□□ 1.95
BRF1-213ENST00000548421 C9JVG2 144 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 SCAMP2O15127 329 aaKnown RBP27.23■■□□□ 1.95
BRF1-213ENST00000548421 CCL4P13236 92 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 CD1EP15812 388 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 RPL3P39023 403 aaKnown RBP27.23■■□□□ 1.95
BRF1-213ENST00000548421 ZFP36L2P47974 494 aaKnown RBP27.23■■□□□ 1.95
BRF1-213ENST00000548421 KCNK10P57789 538 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 RUNX2Q13950 521 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 DTWD1Q8N5C7 304 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 MAPKAP1Q9BPZ7 522 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 FAIM2Q9BWQ8 316 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 REEP4Q9H6H4 257 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 ARL8BQ9NVJ2 186 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 DAPP1Q9UN19 280 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 ATG4BQ9Y4P1 393 aa27.23■■□□□ 1.95
BRF1-213ENST00000548421 H0YIG0 161 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 NR5A2O00482 541 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 DSCR3O14972 297 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 RDH16O75452 317 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 SCRG1O75711 98 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms