RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 CPEB2Q7Z5Q1 589 aaKnown RBP10.28□□□□□ -0.76
GCN1-202ENST00000547263 RBMXL3Q8N7X1 1067 aaKnown RBP10.28□□□□□ -0.76
GCN1-202ENST00000547263 BANPQ8N9N5 519 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 OR4F6Q8NGB9 312 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 RDH11Q8TC12 318 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 REPS1Q96D71 796 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 SCYL1Q96KG9 808 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 ZNF382Q96SR6 550 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 TUBB6Q9BUF5 446 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 ROGDIQ9GZN7 287 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 LHPPQ9H008 270 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 GSTO2Q9H4Y5 243 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 ZNF71Q9NQZ8 489 aaPredicted RBP10.28□□□□□ -0.76
GCN1-202ENST00000547263 GRID1Q9ULK0 1009 aa10.28□□□□□ -0.76
GCN1-202ENST00000547263 SPTA1P02549 2419 aa10.27□□□□□ -0.76
GCN1-202ENST00000547263 A0A088AWK7 358 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 A0A0A6YYD5 115 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 NSG1A0A0A6YYJ2 146 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 SYNDIG1LA6NDD5 238 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 TGFBR3LH3BV60 316 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 B3GALT2O43825 422 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 OTCP00480 354 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 TGFB1P01137 390 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 PRR35P0CG20 571 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 ICAM2P13598 275 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 KRT4P19013 534 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 TAC1P20366 129 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 ZNF10P21506 573 aaPredicted RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 PTX3P26022 381 aaPredicted RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 CERS1P27544 350 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 BSGP35613 385 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 CASRP41180 1078 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 CCNG1P51959 295 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 PGDP52209 483 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 HNRNPFP52597 415 aaKnown RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 PLA2G16P53816 162 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 RPS13P62277 151 aaKnown RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 IGLV3-21P80748 117 aaPredicted RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 ZNF33BQ06732 778 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 TGM3Q08188 693 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 KLRB1Q12918 225 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 TERF2Q15554 542 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 CPSF6Q16630 551 aaKnown RBP eCLIP10.27□□□□□ -0.77
GCN1-202ENST00000547263 CRB2Q5IJ48 1285 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 FRG2Q64ET8 278 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 JMJD6Q6NYC1 403 aaPredicted RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 Q6ZS92 163 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 CHSY3Q70JA7 882 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 RPS27LQ71UM5 84 aaKnown RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 ZNF595Q8IYB9 648 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 RNF175Q8N4F7 328 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 ACOT4Q8N9L9 421 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 Q8NA96 180 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 TMEM52Q8NDY8 209 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 NFAM1Q8NET5 270 aaPredicted RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 TSLPQ969D9 159 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 CCDC126Q96EE4 140 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 C11orf24Q96F05 449 aaPredicted RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 CDK15Q96Q40 435 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 FRG2BQ96QU4 278 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 DDX31Q9H8H2 851 aaKnown RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 ZNF160Q9HCG1 818 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 NECTIN3Q9NQS3 549 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 PRDM9Q9NQV7 894 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 C19orf25Q9UFG5 118 aaPredicted RBP10.27□□□□□ -0.77
GCN1-202ENST00000547263 PLLPQ9Y342 182 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 ANGPTL3Q9Y5C1 460 aa10.27□□□□□ -0.77
GCN1-202ENST00000547263 ZNF462Q96JM2 2506 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 A0A0G2JN53 185 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 BLACEA4D250 179 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 EIF4E1BA6NMX2 242 aaKnown RBP10.26□□□□□ -0.77
GCN1-202ENST00000547263 FAM227AF5H4B4 570 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 H3BQF6 201 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 DPM1O60762 260 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 PCNAP12004 261 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 PLA2G2AP14555 144 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 KRT15P19012 456 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 CCT5P48643 541 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 CD97P48960 835 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 GPR143P51810 404 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 CDH13P55290 713 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 AP2B1P63010 937 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 BTG2P78543 158 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 EEF1A2Q05639 463 aaKnown RBP10.26□□□□□ -0.77
GCN1-202ENST00000547263 ZNF844Q08AG5 666 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 ABRAXAS2Q15018 415 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 MINDY4Q4G0A6 757 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 OR4C11Q6IEV9 310 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 RNF165Q6ZSG1 346 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 MILR1Q7Z6M3 343 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 KBTBD2Q8IY47 623 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 OR6Y1Q8NGX8 325 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 M1APQ8TC57 530 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 ELP5Q8TE02 316 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 PPP4R1Q8TF05 950 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 METTL21AQ8WXB1 218 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 CCT6BQ92526 530 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 APOPT1Q96IL0 206 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 FAR2Q96K12 515 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 LMF1Q96S06 567 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms