RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 IL20RBQ6UXL0 311 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 MBOAT1Q6ZNC8 495 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 FAM109AQ8N4B1 249 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 CCDC89Q8N998 374 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 ABHD11Q8NFV4 315 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 NANOS1Q8WY41 292 aaKnown RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 KCNJ9Q92806 393 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 NCLNQ969V3 563 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 VMP1Q96GC9 406 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 PDLIM2Q96JY6 352 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 SGPP1Q9BX95 441 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 INTS10Q9NVR2 710 aaKnown RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 ALKBH4Q9NXW9 302 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 B4GALT7Q9UBV7 327 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 ADAMTS6Q9UKP5 1117 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 PPIEQ9UNP9 301 aaKnown RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 PDE10AQ9Y233 779 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 REXO2Q9Y3B8 237 aaKnown RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 EPN1Q9Y6I3 576 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 ATP6AP2A0A1C7CYW4 349 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 FAM47E-STBD1D6RA91 191 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 PSMD12O00232 456 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-208ENST00000546534 AQP7O14520 342 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 SUSD5O60279 629 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 ATP6AP2O75787 350 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 CNR1P21554 472 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 PPP2R1BP30154 601 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 SOX3P41225 446 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 HNF4AP41235 474 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 MAN2A2P49641 1150 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 RAB8AP61006 207 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 PRR20EP86478 221 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 PRR20CP86479 221 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 PRR20DP86480 221 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 PRR20BP86481 221 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 PRR20AP86496 221 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 TERF2Q15554 542 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 ZNF750Q32MQ0 723 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 WLSQ5T9L3 541 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 FBXW10Q5XX13 1052 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 GK5Q6ZS86 529 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 ABHD13Q7L211 337 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 GPALPP1Q8IXQ4 340 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 CPNE9Q8IYJ1 553 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 RELL2Q8NC24 303 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-208ENST00000546534 OR4K1Q8NGD4 311 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 NT5CQ8TCD5 201 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 CD200R1Q8TD46 325 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 UTP15Q8TED0 518 aaKnown RBP11.81□□□□□ -0.52
SCAF11-208ENST00000546534 SREK1Q8WXA9 508 aaKnown RBP11.81□□□□□ -0.52
SCAF11-208ENST00000546534 ASB15Q8WXK1 588 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 GPR21Q99679 349 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 SH3GL2Q99962 352 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 FAM173AQ9BQD7 235 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 CCDC77Q9BR77 488 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 FRMD8P1Q9BZ68 369 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-208ENST00000546534 CLK4Q9HAZ1 481 aaKnown RBP11.81□□□□□ -0.52
SCAF11-208ENST00000546534 NEUROD4Q9HD90 331 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 FBXO6Q9NRD1 293 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-208ENST00000546534 SOX13Q9UN79 622 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 CSPG4Q6UVK1 2322 aa11.81□□□□□ -0.52
SCAF11-208ENST00000546534 TRBC2A0A5B9 178 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 CTAGE15A4D2H0 777 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 CTAGE9A4FU28 777 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 TGFBR3LH3BV60 316 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 AP3B1O00203 1094 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 ZFAND5O76080 213 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 CCND1P24385 295 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 ANP32AP39687 249 aaKnown RBP11.8□□□□□ -0.52
SCAF11-208ENST00000546534 CCR8P51685 355 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 BASP1P80723 227 aaKnown RBP11.8□□□□□ -0.52
SCAF11-208ENST00000546534 RGS1Q08116 209 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 FOXO1Q12778 655 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 SLC10A1Q14973 349 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 HECTD2Q5U5R9 776 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 ZNF470Q6ECI4 717 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 SEM1Q6ZVN7 128 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 CTAGE6Q86UF2 777 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 DENND6AQ8IWF6 608 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 SPATA3Q8NHX4 192 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 RNASE6Q93091 150 aaKnown RBP11.8□□□□□ -0.52
SCAF11-208ENST00000546534 SARAFQ96BY9 339 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 RASL10BQ96S79 203 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 AARSD1Q9BTE6 412 aaKnown RBP11.8□□□□□ -0.52
SCAF11-208ENST00000546534 CCDC68Q9H2F9 335 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 SPNS1Q9H2V7 528 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 LDAHQ9H6V9 325 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-208ENST00000546534 PLEKHF2Q9H8W4 249 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 IL1RL2Q9HB29 575 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 SAMD15Q9P1V8 674 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 MYOTQ9UBF9 498 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 ZFP69BQ9UJL9 534 aa11.8□□□□□ -0.52
SCAF11-208ENST00000546534 VPS13CQ709C8 3753 aa11.79□□□□□ -0.52
SCAF11-208ENST00000546534 POM121CA8CG34 1229 aa11.79□□□□□ -0.52
SCAF11-208ENST00000546534 HSPB2A8KAH6 182 aa11.79□□□□□ -0.52
SCAF11-208ENST00000546534 FAM171A2A8MVW0 826 aa11.79□□□□□ -0.52
SCAF11-208ENST00000546534 C4orf51C9J302 202 aa11.79□□□□□ -0.52
SCAF11-208ENST00000546534 WWP2O00308 870 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms