RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 IGDCC3Q8IVU1 814 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 C8orf59Q8N0T1 100 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-218ENST00000545889 ZNF433Q8N7K0 673 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-218ENST00000545889 ZDHHC1Q8WTX9 485 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 WBP2Q969T9 261 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 PRAP1Q96NZ9 151 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 MAGEE1Q9HCI5 957 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 COPG2Q9UBF2 871 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 PRODH2Q9UF12 536 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 PLAGL1Q9UM63 463 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 SORCS3Q9UPU3 1222 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 YBX2Q9Y2T7 364 aaKnown RBP8.29□□□□□ -1.08
CLIP1-218ENST00000545889 IRAK3Q9Y616 596 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 PCNTO95613 3336 aa8.29□□□□□ -1.08
CLIP1-218ENST00000545889 PGRMC2O15173 223 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 MED26O95402 600 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 RNH1P13489 461 aaKnown RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 CD38P28907 300 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 CTSKP43235 329 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 KCNJ11Q14654 390 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 RFX4Q33E94 735 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ZIK1Q3SY52 487 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ZNF311Q5JNZ3 666 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NADSYN1Q6IA69 706 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ZNF783Q6ZMS7 281 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 PTCHD4Q6ZW05 846 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 OR2T34Q8NGX1 318 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ZNF689Q96CS4 500 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 MED30Q96HR3 178 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 UQCC2Q9BRT2 126 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 DUSP26Q9BV47 211 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NUAK2Q9H093 628 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SLC2A6Q9UGQ3 507 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SPATA2Q9UM82 520 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ATG2BQ96BY7 2078 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NUDT1P36639 197 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 MC1RQ01726 317 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 BNIP2Q12982 314 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SEMA3AQ14563 771 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SIRPB2Q5JXA9 342 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 C6orf132Q5T0Z8 1188 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 TMEM225Q6GV28 225 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NANOGP8Q6NSW7 305 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 DNM1P34Q6PK57 102 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SMARCD3Q6STE5 483 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 FAM92BQ6ZTR7 304 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 CNTD1Q8N815 330 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 OR6K6Q8NGW6 343 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 FRS2Q8WU20 508 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 FATE1Q969F0 183 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ZNF486Q96H40 463 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 TMEM246Q9BRR3 403 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 C6orf62Q9GZU0 229 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 MVB12BQ9H7P6 319 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 EGFL7Q9UHF1 273 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ZFR2Q9UPR6 939 aaKnown RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 A0A0U1RQS6 177 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NRP2O60462 931 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 CPNE6O95741 557 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 KLK1P06870 262 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 C6P13671 934 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ARSAP15289 507 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ACADLP28330 430 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 IL12RB1P42701 662 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 POLR2JP52435 117 aaKnown RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 RAB25P57735 213 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 PXDC1Q5TGL8 231 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 LIN54Q6MZP7 749 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 C1orf94Q6P1W5 598 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 TMEM151BQ8IW70 566 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 MARVELD2Q8N4S9 558 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 EID2Q8N6I1 236 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 PNPLA1Q8N8W4 532 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 CHST4Q8NCG5 386 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SLC22A8Q8TCC7 542 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 RBP7Q96R05 134 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 CRB3Q9BUF7 120 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 OR51V1Q9H2C8 321 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 TBC1D17Q9HA65 648 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SMURF2Q9HAU4 748 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 MS4A12Q9NXJ0 267 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 UTS2RQ9UKP6 389 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 U3KQV3 271 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ASCC3Q8N3C0 2202 aaKnown RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ARHGEF33A8MVX0 844 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 MAGEB17A8MXT2 336 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 NPIPA5E9PKD4 350 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 H3BNC9 293 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 WRBO00258 174 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ABCB7O75027 752 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 TNFRSF21O75509 655 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 GSRP00390 522 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ABOP16442 354 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 CCT3P49368 545 aaKnown RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SGSHP51688 502 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 ARSFP54793 590 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 SPANXN2Q5MJ10 180 aa8.28□□□□□ -1.08
CLIP1-218ENST00000545889 OTUD1Q5VV17 481 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-218ENST00000545889 FRG2Q64ET8 278 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms