RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CA13Q8N1Q1 262 aa15.4■□□□□ 0.06
LIMS2-217ENST00000545738 GBP7Q8N8V2 638 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-217ENST00000545738 PIWIL2Q8TC59 973 aaKnown RBP15.4■□□□□ 0.06
LIMS2-217ENST00000545738 FGF11Q92914 225 aa15.4■□□□□ 0.06
LIMS2-217ENST00000545738 UCN3Q969E3 161 aa15.4■□□□□ 0.06
LIMS2-217ENST00000545738 RGMAQ96B86 450 aa15.4■□□□□ 0.06
LIMS2-217ENST00000545738 MAPKAP1Q9BPZ7 522 aa15.4■□□□□ 0.06
LIMS2-217ENST00000545738 CCDC134Q9H6E4 229 aa15.4■□□□□ 0.06
LIMS2-217ENST00000545738 DDX31Q9H8H2 851 aaKnown RBP15.4■□□□□ 0.06
LIMS2-217ENST00000545738 KCMF1Q9P0J7 381 aa15.4■□□□□ 0.06
LIMS2-217ENST00000545738 IL17BQ9UHF5 180 aa15.4■□□□□ 0.06
LIMS2-217ENST00000545738 NUP210LQ5VU65 1888 aa15.39■□□□□ 0.06
LIMS2-217ENST00000545738 ATMQ13315 3056 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 URADA6NGE7 173 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 FAM227AF5H4B4 570 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 CHST10O43529 356 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 EDF1O60869 148 aaKnown RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 KLF7O75840 302 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 KLK1P06870 262 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 FBLP22087 321 aaKnown RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 RAP1GDS1P52306 607 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 HNRNPH2P55795 449 aaKnown RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 ZNF33BQ06732 778 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 RFTN2Q52LD8 501 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 MRM1Q6IN84 353 aaKnown RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 UNQ6494/PRO21346Q6UXR6 183 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 ZC3H7AQ8IWR0 971 aaKnown RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 MMP21Q8N119 569 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 ESX1Q8N693 406 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 OR51Q1Q8NH59 317 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 SNIP1Q8TAD8 396 aaKnown RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 COL26A1Q96A83 441 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 THOC1Q96FV9 657 aaKnown RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 PEX11GQ96HA9 241 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 SPSB2Q99619 263 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 TBCDQ9BTW9 1192 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 EBPLQ9BY08 206 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 CCDC86Q9H6F5 360 aaKnown RBP15.39■□□□□ 0.05
LIMS2-217ENST00000545738 DLGAP4Q9Y2H0 992 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 MAP4K5Q9Y4K4 846 aa15.39■□□□□ 0.05
LIMS2-217ENST00000545738 IGLV3-12A0A075B6K2 115 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 ARHGAP10A1A4S6 786 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 WASHC1A8K0Z3 465 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 NPIPB8E9PQR5 432 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 SDHDO14521 159 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 RSL1D1O76021 490 aaKnown RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 SNUPNO95149 360 aaKnown RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 KLK3P07288 261 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 TCN2P20062 427 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 PRPH2P23942 346 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 AVPR1BP47901 424 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 MTTPP55157 894 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 LIM2P55344 173 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 PCBP4P57723 403 aaKnown RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 NCF4Q15080 339 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 NKG7Q16617 165 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 SLC9B1Q4ZJI4 515 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 MLIPQ5VWP3 458 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 PRSS58Q8IYP2 241 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 AMER2Q8N7J2 671 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 ENDOVQ8N8Q3 282 aaKnown RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 SLC45A3Q96JT2 553 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 ZNF317Q96PQ6 595 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 SERINC2Q96SA4 455 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 WDR55Q9H6Y2 383 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 MEAF6Q9HAF1 191 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 TEX10Q9NXF1 929 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 IFT80Q9P2H3 777 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 TRPC4Q9UBN4 977 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 DAPP1Q9UN19 280 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 ATG4BQ9Y4P1 393 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 POLR3HQ9Y535 204 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 ASB4Q9Y574 426 aa15.38■□□□□ 0.05
LIMS2-217ENST00000545738 MAP1BP46821 2468 aaKnown RBP15.38■□□□□ 0.05
LIMS2-217ENST00000545738 VSTM2BA6NLU5 285 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 HDAC3O15379 428 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 EFSO43281 561 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 CDC123O75794 336 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-217ENST00000545738 CHEK2O96017 543 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 PRR35P0CG20 571 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 LIFP15018 202 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 TACR1P25103 407 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 XCR1P46094 333 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 NR6A1Q15406 480 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 IMPG1Q17R60 797 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 AP5B1Q2VPB7 878 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 GALNTL6Q49A17 601 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 SPDYAQ5MJ70 313 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 OVCH1Q7RTY7 1134 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 CRLF3Q8IUI8 442 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 ZCCHC7Q8N3Z6 543 aaKnown RBP15.37■□□□□ 0.05
LIMS2-217ENST00000545738 STT3BQ8TCJ2 826 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 FAR2Q96K12 515 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 DPH2Q9BQC3 489 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-217ENST00000545738 LANCL2Q9NS86 450 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 FGFR1OP2Q9NVK5 253 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 SLC28A1O00337 649 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 CYR61O00622 381 aa15.37■□□□□ 0.05
LIMS2-217ENST00000545738 POLR3GO15318 223 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-217ENST00000545738 PEX11AO75192 247 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms