RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PAPD4Q6PIY7 484 aaKnown RBP14.78□□□□□ -0.04
CCDC78-216ENST00000544996 CYP4X1Q8N118 509 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 SIRT6Q8N6T7 355 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 HUS1BQ8NHY5 278 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 QRFPRQ96P65 431 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 EPB41L4BQ9H329 900 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 CLMPQ9H6B4 373 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 NOL11Q9H8H0 719 aaKnown RBP14.78□□□□□ -0.04
CCDC78-216ENST00000544996 PRDM7Q9NQW5 492 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 MAP10Q9P2G4 905 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 TBK1Q9UHD2 729 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 PLAAQ9Y263 795 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 TSC22D4Q9Y3Q8 395 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 MMACHCQ9Y4U1 282 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 SPACA6W5XKT8 324 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 BSNQ9UPA5 3926 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 A8MUI8 341 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 MAOAP21397 527 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 CERS1P27544 350 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 SOX11P35716 441 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 RAP1GDS1P52306 607 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 HSD17B7P56937 341 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 ARG2P78540 354 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 TLR1Q15399 786 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 INPP5JQ15735 1006 aaPredicted RBP14.77□□□□□ -0.05
CCDC78-216ENST00000544996 CPSF6Q16630 551 aaKnown RBP eCLIP14.77□□□□□ -0.05
CCDC78-216ENST00000544996 KHDRBS2Q5VWX1 349 aaKnown RBP14.77□□□□□ -0.05
CCDC78-216ENST00000544996 L3MBTL4Q8NA19 623 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 Q8NA96 180 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 M1APQ8TC57 530 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 MIB2Q96AX9 1013 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 CNDP1Q96KN2 507 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 MAGEB10Q96LZ2 347 aaPredicted RBP14.77□□□□□ -0.05
CCDC78-216ENST00000544996 MTERF1Q99551 399 aaKnown RBP14.77□□□□□ -0.05
CCDC78-216ENST00000544996 ANKZF1Q9H8Y5 726 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 KCNK13Q9HB14 408 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 MMP25Q9NPA2 562 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 PRTFDC1Q9NRG1 225 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 STMN3Q9NZ72 180 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 PCTPQ9UKL6 214 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 DAPP1Q9UN19 280 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 RNF11Q9Y3C5 154 aa14.77□□□□□ -0.05
CCDC78-216ENST00000544996 TNRC6AQ8NDV7 1962 aaKnown RBP14.76□□□□□ -0.05
CCDC78-216ENST00000544996 NUP210LQ5VU65 1888 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 TCRBV16S1A1N1A0A5B0 115 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 VPS4BO75351 444 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 SH3BGRLO75368 114 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 GSTA1P08263 222 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 ATP5A1P25705 553 aaKnown RBP14.76□□□□□ -0.05
CCDC78-216ENST00000544996 PTX3P26022 381 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-216ENST00000544996 SSR2P43308 183 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 LIM2P55344 173 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 SLC13A2Q13183 592 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 DEPDC1Q5TB30 811 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 ZNF595Q8IYB9 648 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 ACOT4Q8N9L9 421 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 RGMAQ96B86 450 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 OR51B5Q9H339 312 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 LYRM4Q9HD34 91 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 DMRT3Q9NQL9 472 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 TMEM216Q9P0N5 145 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 DCDC2Q9UHG0 476 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 VPS4AQ9UN37 437 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 SCN3AQ9NY46 2000 aa14.76□□□□□ -0.05
CCDC78-216ENST00000544996 IGKV3D-11A0A0A0MRZ8 115 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 SYNDIG1LA6NDD5 238 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 A8MT66 165 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 GOLGA8RI6L899 631 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 SAP18O00422 153 aaKnown RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 OR7A17O14581 309 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 SLU7O95391 586 aaKnown RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 OTCP00480 354 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 PYGBP11216 843 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 HIST1H1TP22492 207 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 TSFMP43897 325 aaKnown RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 ARFIP1P53367 373 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 SLC26A5P58743 744 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 TAS2R50P59544 299 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 RPS13P62277 151 aaKnown RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 ZNF33BQ06732 778 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 ZNF169Q14929 603 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 ZRSR2Q15696 482 aaKnown RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 C10orf62Q5T681 223 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 B3GNTL1Q67FW5 361 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 TTC19Q6DKK2 380 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 OR4C11Q6IEV9 310 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 UBE3DQ7Z6J8 389 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 MILR1Q7Z6M3 343 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 CUZD1Q86UP6 607 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 TMEM151AQ8N4L1 468 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 CISD2Q8N5K1 135 aaKnown RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 SLC5A8Q8N695 610 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 FAM47BQ8NA70 645 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 OR52B6Q8NGF0 335 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 HAS2Q92819 552 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 ZNF354BQ96LW1 612 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 CDK15Q96Q40 435 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 NTMT1Q9BV86 223 aa14.75□□□□□ -0.05
CCDC78-216ENST00000544996 SEMA4BQ9NPR2 832 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-216ENST00000544996 NECTIN3Q9NQS3 549 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms