RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MYBPC3Q14896 1274 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 PDK4Q16654 411 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 C18orf21Q32NC0 220 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 XKR6Q5GH73 641 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 PAGE2BQ5JRK9 111 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 MFSD4BQ5TF39 518 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 VWA5B1Q5TIE3 1220 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 ATG9BQ674R7 924 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 KIRREL2Q6UWL6 708 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 TMIGD1Q6UXZ0 262 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 LRRC70Q7Z2Q7 622 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 AMER3Q8N944 861 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 ZNF740Q8NDX6 193 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 OR51Q1Q8NH59 317 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 NT5CQ8TCD5 201 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 KCTD4Q8WVF5 259 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 TM9SF4Q92544 642 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 UTP4Q969X6 686 aaKnown RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 ISL2Q96A47 359 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 ESAMQ96AP7 390 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 PTCD3Q96EY7 689 aaKnown RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 ATOH8Q96SQ7 321 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 PAFAH2Q99487 392 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 SMAD5Q99717 465 aaKnown RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 TMEM79Q9BSE2 394 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 EFCAB11Q9BUY7 163 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 CD244Q9BZW8 370 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 VPS11Q9H270 941 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 SPNS1Q9H2V7 528 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 EHD1Q9H4M9 534 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 GSX1Q9H4S2 264 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 NT5DC2Q9H857 520 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 CLK4Q9HAZ1 481 aaKnown RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 OPTCQ9UBM4 332 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 C19orf25Q9UFG5 118 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 ZNF180Q9UJW8 692 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 FBXL4Q9UKA2 621 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 MRPS2Q9Y399 296 aaKnown RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 NAALAD2Q9Y3Q0 740 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 ANGPTL3Q9Y5C1 460 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 HS3ST3B1Q9Y662 390 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 GCN1Q92616 2671 aaKnown RBP6.97□□□□□ -1.29
CPSF7-224ENST00000544990 PIEZO2Q9H5I5 2752 aa6.97□□□□□ -1.29
CPSF7-224ENST00000544990 SCN2AQ99250 2005 aa6.96□□□□□ -1.29
CPSF7-224ENST00000544990 A0A088AWK7 358 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 NSG1A0A0A6YYJ2 146 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 HMX2A2RU54 273 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 K7EM74 188 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 K7EPI3 171 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 SGK494L7N484 410 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 UBXN8O00124 270 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 FFAR3O14843 346 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 GPR42O15529 346 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 GALR3O60755 368 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 ALOX12BO75342 701 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 KLHL18O94889 574 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 HPP00738 406 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 ALDOAP04075 364 aaKnown RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 ABHD2P08910 425 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 SNRPAP09012 282 aaKnown RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 RBP1P09455 135 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 COL6A2P12110 1019 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 ICAM2P13598 275 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 GFAPP14136 432 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF10P21506 573 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 COL8A1P27658 744 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 NOS3P29474 1203 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 XCR1P46094 333 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 GLRBP48167 497 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 KCNC1P48547 511 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 CSRP3P50461 194 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 AP2B1P63010 937 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 MAT1AQ00266 395 aaKnown RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 IRF9Q00978 393 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 IRF8Q02556 426 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 CHIT1Q13231 466 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 SLBPQ14493 270 aaKnown RBP eCLIP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 SYT16Q17RD7 645 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 MINDY4Q4G0A6 757 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 DEFB134Q4QY38 66 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 FBXO48Q5FWF7 155 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 NDUFAF7Q7L592 441 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 PRSS41Q7RTY9 318 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 TMEM151BQ8IW70 566 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 ZC3H7AQ8IWR0 971 aaKnown RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 CENPLQ8N0S6 344 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 AFAP1L2Q8N4X5 818 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 EIF1ADQ8N9N8 165 aaKnown RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 ANKRD53Q8N9V6 530 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 OR11G2Q8NGC1 345 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 UHMK1Q8TAS1 419 aaKnown RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 CCT6BQ92526 530 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 UBE2E3Q969T4 207 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 MOCOSQ96EN8 888 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 FAR2Q96K12 515 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 OR1F2PQ96R84 312 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 CCDC77Q9BR77 488 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 NUDT9Q9BW91 350 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 LHPPQ9H008 270 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms