RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TGIF2LYQ8IUE0 185 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 CRLF3Q8IUI8 442 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 AMER2Q8N7J2 671 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 GAL3ST3Q96A11 431 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 EHD1Q9H4M9 534 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 KLHL31Q9H511 634 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 NT5DC2Q9H857 520 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 CAB39LQ9H9S4 337 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 PRDM9Q9NQV7 894 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 DNAJC11Q9NVH1 559 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 WWOXQ9NZC7 414 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 MEMO1Q9Y316 297 aa15.18■□□□□ 0.02
DDX55-212ENST00000544738 NCOA6Q14686 2063 aaPredicted RBP15.17■□□□□ 0.02
DDX55-212ENST00000544738 ANKDD1BA6NHY2 528 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 FAM227AF5H4B4 570 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 CLGNO14967 610 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 CD1DP15813 335 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 KLK2P20151 261 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 CD96P40200 585 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 PLTPP55058 493 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 ETF1P62495 437 aaKnown RBP15.17■□□□□ 0.02
DDX55-212ENST00000544738 PPP2R2AP63151 447 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 BTN3A2P78410 334 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 C2orf54Q08AI8 447 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 TUBA3CQ13748 450 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 C18orf21Q32NC0 220 aaPredicted RBP15.17■□□□□ 0.02
DDX55-212ENST00000544738 GRTP1Q5TC63 336 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 TUBA3EQ6PEY2 450 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 SPPL2CQ8IUH8 684 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 CTAGE3PQ8IX95 158 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 CYP4X1Q8N118 509 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 ELP5Q8TE02 316 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 UBXN10Q96LJ8 280 aa15.17■□□□□ 0.02
DDX55-212ENST00000544738 NPLQ9BXD5 320 aaPredicted RBP15.17■□□□□ 0.02
DDX55-212ENST00000544738 IGKV3D-11A0A0A0MRZ8 115 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 TCRBV16S1A1N1A0A5B0 115 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 FAM221AA4D161 298 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 CTAGE15A4D2H0 777 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 GABRR3A8MPY1 467 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 PHGDHO43175 533 aaKnown RBP15.16■□□□□ 0.02
DDX55-212ENST00000544738 CLEC3AO75596 197 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 STK16O75716 305 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 MLYCDO95822 493 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 S100BP04271 92 aaPredicted RBP15.16■□□□□ 0.02
DDX55-212ENST00000544738 CD46P15529 392 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 IST1P53990 364 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 GPX6P59796 221 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 RAB10P61026 200 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 BTG2P78543 158 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 SLBPQ14493 270 aaKnown RBP eCLIP15.16■□□□□ 0.02
DDX55-212ENST00000544738 OR1C1Q15619 314 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 CTAGE6Q86UF2 777 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 RPS19BP1Q86WX3 136 aaKnown RBP15.16■□□□□ 0.02
DDX55-212ENST00000544738 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.16■□□□□ 0.02
DDX55-212ENST00000544738 CA13Q8N1Q1 262 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 SPATA6LQ8N4H0 392 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 TMEM178AQ8NBL3 297 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 MDS2Q8NDY4 140 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 CHDHQ8NE62 594 aaPredicted RBP15.16■□□□□ 0.02
DDX55-212ENST00000544738 CA5BP1Q8WTZ4 195 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 CCT6BQ92526 530 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 NRGNQ92686 78 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 KIAA1191Q96A73 305 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 MS4A6EQ96DS6 147 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 PTCD3Q96EY7 689 aaKnown RBP15.16■□□□□ 0.02
DDX55-212ENST00000544738 EFCAB11Q9BUY7 163 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 RHBGQ9H310 441 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 CD274Q9NZQ7 290 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 MMACHCQ9Y4U1 282 aa15.16■□□□□ 0.02
DDX55-212ENST00000544738 AKAP6Q13023 2319 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 LRIT2A6NDA9 550 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 SYNDIG1LA6NDD5 238 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 SAGE2PA6NJ88 616 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 CLDN4O14493 209 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 TAPBPO15533 448 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 ERI3O43414 337 aaKnown RBP15.15■□□□□ 0.02
DDX55-212ENST00000544738 MAOAP21397 527 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 EEF1DP29692 281 aaKnown RBP15.15■□□□□ 0.02
DDX55-212ENST00000544738 DNAJA1P31689 397 aaKnown RBP15.15■□□□□ 0.02
DDX55-212ENST00000544738 STX2P32856 288 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 OC90Q02509 493 aaPredicted RBP15.15■□□□□ 0.02
DDX55-212ENST00000544738 LAPTM5Q13571 262 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 ZKSCAN8Q15776 578 aaPredicted RBP15.15■□□□□ 0.02
DDX55-212ENST00000544738 PDK4Q16654 411 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 HIST2H2ACQ16777 129 aaPredicted RBP15.15■□□□□ 0.02
DDX55-212ENST00000544738 KBTBD12Q3ZCT8 623 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 HIST2H2AA3Q6FI13 130 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 TRIM40Q6P9F5 258 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 TMEM200AQ86VY9 491 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 CCDC25Q86WR0 208 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 FAM98AQ8NCA5 519 aaKnown RBP15.15■□□□□ 0.02
DDX55-212ENST00000544738 PDPRQ8NCN5 879 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 STAG3L4Q8TBR4 150 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 FBXO25Q8TCJ0 367 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 WDR34Q96EX3 536 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 SIGLEC12Q96PQ1 595 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 NPAS2Q99743 824 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 TMEM79Q9BSE2 394 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 CDCP1Q9H5V8 836 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 PTBP2Q9UKA9 531 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms