RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TMCO6Q96DC7 493 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 CRELD1Q96HD1 420 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 TGM7Q96PF1 710 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 RANBP9Q96S59 729 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 PRTFDC1Q9NRG1 225 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
CHD4-211ENST00000544484 SNAP29O95721 258 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 UQCRC2P22695 453 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 SLC6A4P31645 630 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 VEGFBP49765 207 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 CEBPGP53567 150 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 RUNX3Q13761 415 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 NFE2L1Q14494 772 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 WDR45BQ5MNZ6 344 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 C1orf94Q6P1W5 598 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 ASPGQ86U10 573 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 ZNF101Q8IZC7 436 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 HAVCR1Q96D42 359 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 OR51I1Q9H343 314 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 PAK6Q9NQU5 681 aaPredicted RBP12.32□□□□□ -0.44
CHD4-211ENST00000544484 GJD2Q9UKL4 321 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 ACSL6Q9UKU0 697 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 CHD2O14647 1828 aaKnown RBP12.32□□□□□ -0.44
CHD4-211ENST00000544484 XPNPEP2O43895 674 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 NPPAP01160 153 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 SLC2A2P11168 524 aaPredicted RBP12.32□□□□□ -0.44
CHD4-211ENST00000544484 FDXRP22570 491 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 NRROSQ86YC3 692 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 OR6N1Q8NGY5 312 aa12.32□□□□□ -0.44
CHD4-211ENST00000544484 AREL1O15033 823 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 AHSA1O95433 338 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 MRPL3P09001 348 aaKnown RBP12.31□□□□□ -0.44
CHD4-211ENST00000544484 MPC1LP0DKB6 136 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 BMPR1AP36894 532 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 SPINT3P49223 89 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.31□□□□□ -0.441e-7■■■□□ 16.6
CHD4-211ENST00000544484 P4HA3Q7Z4N8 544 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 ZFAND4Q86XD8 727 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 C3orf58Q8NDZ4 430 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 MND1Q9BWT6 205 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 SPO11Q9Y5K1 396 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 MYH7P12883 1935 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 HK1P19367 917 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 GRIA2P42262 883 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 POU6F2P78424 691 aaPredicted RBP12.31□□□□□ -0.44
CHD4-211ENST00000544484 PUDPQ08623 228 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 ELOCQ15369 112 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 USP53Q70EK8 1073 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 C12orf40Q86WS4 652 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 OR4N5Q8IXE1 308 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 MUS81Q96NY9 551 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 FAM129BQ96TA1 746 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 HCFC1R1Q9NWW0 138 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 CA14Q9ULX7 337 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 A0A1W2PRG6 482 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 SCGNO76038 276 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 RAB33AQ14088 237 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 MEAF6Q9HAF1 191 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 IRS2Q9Y4H2 1338 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 KCNJ5P48544 419 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 VBP1P61758 197 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 SH3BP2P78314 561 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 KBTBD6Q86V97 674 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 TPSD1Q9BZJ3 242 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 TRIM36Q9NQ86 728 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 PCDHB14Q9Y5E9 798 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 DNAJC15Q9Y5T4 150 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 M0QZQ0 153 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 PEX12O00623 359 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 HEXBP07686 556 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 JUPP14923 745 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 CCNOP22674 350 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 PDX1P52945 283 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 PIGFQ07326 219 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 KCNAB2Q13303 367 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 TRAM2Q15035 370 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 CST6Q15828 149 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 STEAP4Q687X5 459 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 PM20D1Q6GTS8 502 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 CRTC1Q6UUV9 634 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 SNX29P2Q8IUI4 249 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 LINC00471Q8N535 108 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 NUP43Q8NFH3 380 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 HUS1BQ8NHY5 278 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 ZUFSPQ96AP4 578 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 DHRS1Q96LJ7 313 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 AIG1Q9NVV5 245 aa12.31□□□□□ -0.44
CHD4-211ENST00000544484 AURKAO14965 403 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 PIM1P11309 404 aaPredicted RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 JUNDP17535 347 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 AP2S1P53680 142 aaPredicted RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 PITPNAQ00169 270 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 GINS1Q14691 196 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 TMEM107Q6UX40 140 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 YTHDF1Q9BYJ9 559 aaKnown RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 NKX2-4Q9H2Z4 354 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 TTYH1Q9H313 450 aaPredicted RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 ACTL8Q9H568 366 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 GRHPRQ9UBQ7 328 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms