RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ABHD13Q7L211 337 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 NET1Q7Z628 596 aaPredicted RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 SLC15A3Q8IY34 581 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 ZCCHC10Q8TBK6 192 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 TCEAL3Q969E4 200 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 NANOGQ9H9S0 305 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 MIEF1Q9NQG6 463 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 PCDHA9Q9Y5H5 950 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 MN1Q10571 1320 aaPredicted RBP28.9■■■□□ 2.22
CCM2-219ENST00000544363 A0A096LPI6 279 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 C15orf38-AP3S2A0A0A6YYH1 394 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 PRSS51A0A1B0GVH4 220 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 CERS1P27544 350 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 CSF2RBP32927 897 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 MLLT3P42568 568 aaPredicted RBP28.9■■■□□ 2.22
CCM2-219ENST00000544363 HNRNPFP52597 415 aaKnown RBP28.9■■■□□ 2.22
CCM2-219ENST00000544363 SAMD4BQ5PRF9 694 aaKnown RBP28.9■■■□□ 2.22
CCM2-219ENST00000544363 LRIF1Q5T3J3 769 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 TMEM214Q6NUQ4 689 aaKnown RBP28.9■■■□□ 2.22
CCM2-219ENST00000544363 ARPINQ7Z6K5 226 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 MMP21Q8N119 569 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 VPS37AQ8NEZ2 397 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 TMEM125Q96AQ2 219 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 INPP5KQ9BT40 448 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 PAIP1Q9H074 479 aaKnown RBP28.9■■■□□ 2.22
CCM2-219ENST00000544363 PDE7BQ9NP56 450 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 SOHLH2Q9NX45 425 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 CMTM6Q9NX76 183 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 TEX10Q9NXF1 929 aaPredicted RBP28.9■■■□□ 2.22
CCM2-219ENST00000544363 ASB4Q9Y574 426 aa28.9■■■□□ 2.22
CCM2-219ENST00000544363 TBX19O60806 448 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 ME2P23368 584 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 TRPC1P48995 793 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 ATXN3P54252 364 aaPredicted RBP28.89■■■□□ 2.22
CCM2-219ENST00000544363 PERM1Q5SV97 790 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 C6orf163Q5TEZ5 329 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 CYB5D1Q6P9G0 228 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 TICAM1Q8IUC6 712 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 RNF148Q8N7C7 305 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 WDR60Q8WVS4 1066 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 NAT6Q93015 286 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 MIEF2Q96C03 454 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 CCDC124Q96CT7 223 aaKnown RBP28.89■■■□□ 2.22
CCM2-219ENST00000544363 VAPAQ9P0L0 249 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 CD300AQ9UGN4 299 aa28.89■■■□□ 2.22
CCM2-219ENST00000544363 CROCCQ5TZA2 2017 aa28.89■■■□□ 2.21
CCM2-219ENST00000544363 NME4O00746 187 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 RFXANKO14593 260 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 GUCY1B2O75343 617 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 GABRA4P48169 554 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 SNRPNP63162 240 aaKnown RBP28.88■■■□□ 2.21
CCM2-219ENST00000544363 SQSTM1Q13501 440 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 WASHC2DQ5SRD0 308 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 LYARQ9NX58 379 aaKnown RBP28.88■■■□□ 2.21
CCM2-219ENST00000544363 SEMA5BQ9P283 1151 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 BTNL2Q9UIR0 455 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 PLCL2Q9UPR0 1127 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 POMPQ9Y244 141 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 NEUROG3Q9Y4Z2 214 aa28.88■■■□□ 2.21
CCM2-219ENST00000544363 RNASET2O00584 256 aaKnown RBP28.87■■■□□ 2.21
CCM2-219ENST00000544363 TXNDC9O14530 226 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 MAP3K7O43318 606 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 ZNF883P0CG24 379 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 DRD2P14416 443 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 ALOX12P18054 663 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 LRRC74AQ0VAA2 488 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 C1orf146Q5VVC0 180 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 LAIR1Q6GTX8 287 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 DNAJC14Q6Y2X3 702 aaPredicted RBP28.87■■■□□ 2.21
CCM2-219ENST00000544363 ZNF764Q96H86 408 aaPredicted RBP28.87■■■□□ 2.21
CCM2-219ENST00000544363 CCDC115Q96NT0 180 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 SERINC2Q96SA4 455 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 FAIM2Q9BWQ8 316 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 SLC25A37Q9NYZ2 338 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 TMEM9Q9P0T7 183 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 L3MBTL1Q9Y468 752 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 PCDHB14Q9Y5E9 798 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 TRBV5-3A0A0A0MS03 114 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 PRORSD1PA6NEY8 169 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 MGRN1O60291 552 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 DDX5P17844 614 aaKnown RBP28.87■■■□□ 2.21
CCM2-219ENST00000544363 ZNF10P21506 573 aaPredicted RBP28.87■■■□□ 2.21
CCM2-219ENST00000544363 PTPN6P29350 595 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 CDKN2CP42773 168 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 ALDH9A1P49189 494 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 KPNB1Q14974 876 aaKnown RBP28.87■■■□□ 2.21
CCM2-219ENST00000544363 PRSS53Q2L4Q9 553 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 PROX2Q3B8N5 592 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 DEFB134Q4QY38 66 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 RABL3Q5HYI8 236 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 NDUFAF5Q5TEU4 345 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 MSRB3Q8IXL7 192 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 CLECL1Q8IZS7 167 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 OR8J3Q8NGG0 315 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 ANKRD27Q96NW4 1050 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 TRIM8Q9BZR9 551 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 SLC6A13Q9NSD5 602 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 STARD5Q9NSY2 213 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 NIPSNAP3AQ9UFN0 247 aaPredicted RBP28.87■■■□□ 2.21
CCM2-219ENST00000544363 MRPS2Q9Y399 296 aaKnown RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms