RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 TBC1D19Q8N5T2 526 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 OR1E3Q8WZA6 343 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 PDXPQ96GD0 296 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 WDR92Q96MX6 357 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 NLNQ9BYT8 704 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 CD93Q9NPY3 652 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 THEGQ9P2T0 379 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 CD207Q9UJ71 328 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 SPTBN5Q9NRC6 3674 aaKnown RBP16.27■□□□□ 0.19
PTPRO-209ENST00000543886 TRIM64A6NGJ6 449 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 VILLO15195 856 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 TBX19O60806 448 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 DNAJA1P31689 397 aaKnown RBP16.26■□□□□ 0.19
PTPRO-209ENST00000543886 SHMT2P34897 504 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 ALDH3B2P48448 385 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 SLC5A12Q1EHB4 618 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 ANKRD34AQ69YU3 496 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 BORAQ6PGQ7 559 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 RD3Q7Z3Z2 195 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 PIWIL3Q7Z3Z3 882 aaKnown RBP16.26■□□□□ 0.19
PTPRO-209ENST00000543886 THAP5Q7Z6K1 395 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 TRIM69Q86WT6 500 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 DOHHQ9BU89 302 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 GABARAPL1Q9H0R8 117 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 RBM38Q9H0Z9 239 aaKnown RBP16.26■□□□□ 0.19
PTPRO-209ENST00000543886 TMEM38AQ9H6F2 299 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 KIR3DX1Q9H7L2 352 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 LHX9Q9NQ69 397 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 SCHIP1Q9P0W5 487 aaPredicted RBP16.26■□□□□ 0.19
PTPRO-209ENST00000543886 CA5BQ9Y2D0 317 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 PRAMEF33A0A0G2JMD5 474 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 TCRBV21S2A2A0A5A6 115 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 DIRAS1O95057 198 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 ETS2P15036 469 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 FPR1P21462 350 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 HNRNPA2B1P22626 353 aaKnown RBP16.26■□□□□ 0.19
PTPRO-209ENST00000543886 IGFBP5P24593 272 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 ACSL1P33121 698 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 SSR2P43308 183 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 PLA2G16P53816 162 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 MANFP55145 182 aaKnown RBP16.26■□□□□ 0.19
PTPRO-209ENST00000543886 ITGA1P56199 1179 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 KCNAB2Q13303 367 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 TMEM35AQ53FP2 167 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 OR4C11Q6IEV9 310 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 FAM20CQ8IXL6 584 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 OR2L3Q8NG85 312 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 NFKBIDQ8NI38 313 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 CREB3L4Q8TEY5 395 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 OR5P2Q8WZ92 322 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 DNASE1L2Q92874 299 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 AMBRA1Q9C0C7 1298 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 REEP1Q9H902 201 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 SLC6A20Q9NP91 592 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 TMEM184CQ9NVA4 438 aa16.26■□□□□ 0.19
PTPRO-209ENST00000543886 SAMHD1Q9Y3Z3 626 aaKnown RBP16.26■□□□□ 0.19
PTPRO-209ENST00000543886 PLXND1Q9Y4D7 1925 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 LRRC72A6NJI9 287 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 H0Y8X5 98 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 TMPRSS11DO60235 418 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 CMPK1P30085 196 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 BCL6P41182 706 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 RXRGP48443 463 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 TPMTP51580 245 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 CRYBA2P53672 197 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 ESRRGP62508 458 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 KCNJ10P78508 379 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 TCEA2Q15560 299 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 ZNF630Q2M218 657 aaPredicted RBP16.25■□□□□ 0.19
PTPRO-209ENST00000543886 FAM180BQ6P0A1 224 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 TMEM92Q6UXU6 159 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 UBE3DQ7Z6J8 389 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 DCP2Q8IU60 420 aaKnown RBP16.25■□□□□ 0.19
PTPRO-209ENST00000543886 EGFL6Q8IUX8 553 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 NMD3Q96D46 503 aaKnown RBP16.25■□□□□ 0.19
PTPRO-209ENST00000543886 C17orf62Q9BQA9 187 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 TMEM121BQ9BXQ6 578 aaPredicted RBP16.25■□□□□ 0.19
PTPRO-209ENST00000543886 DDX31Q9H8H2 851 aaKnown RBP16.25■□□□□ 0.19
PTPRO-209ENST00000543886 C1GALT1Q9NS00 363 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 TBC1D29Q9UFV1 150 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 F5P12259 2224 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 HEATR5BQ9P2D3 2071 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 LRIT2A6NDA9 550 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 TRIM64CA6NLI5 447 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 C2CD4DB7Z1M9 353 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 APBB3O95704 486 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 GSTM2P28161 218 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 NDUFS1P28331 727 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 PIGAP37287 484 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 SELENOWP63302 87 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 CDK6Q00534 326 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 LRRC32Q14392 662 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 CEP68Q76N32 757 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 ZC3H7AQ8IWR0 971 aaKnown RBP16.25■□□□□ 0.19
PTPRO-209ENST00000543886 TMEM145Q8NBT3 493 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 LCN9Q8WX39 176 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 LZICQ8WZA0 190 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 EXOSC8Q96B26 276 aaKnown RBP16.25■□□□□ 0.19
PTPRO-209ENST00000543886 DPH7Q9BTV6 452 aa16.25■□□□□ 0.19
PTPRO-209ENST00000543886 ABCG4Q9H172 646 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms