RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.15□□□□□ -0.3
VPS33A-208ENST00000543633 KIAA1841Q6NSI8 718 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 MED27Q6P2C8 311 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 DNAJB7Q7Z6W7 309 aaPredicted RBP13.15□□□□□ -0.3
VPS33A-208ENST00000543633 BBS7Q8IWZ6 715 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 OR9Q2Q8NGE9 314 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 OR6F1Q8NGZ6 308 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 HUS1BQ8NHY5 278 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 NFKBIDQ8NI38 313 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 LMLNQ96KR4 655 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 SLC22A12Q96S37 553 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 SLC25A19Q9HC21 320 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 SH3BP4Q9P0V3 963 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 B4GALT6Q9UBX8 382 aa13.15□□□□□ -0.3
VPS33A-208ENST00000543633 EXO1Q9UQ84 846 aaKnown RBP13.15□□□□□ -0.3
VPS33A-208ENST00000543633 NUP214P35658 2090 aaPredicted RBP13.15□□□□□ -0.3
VPS33A-208ENST00000543633 PRAMEF25A6NGN4 478 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 FADS2P1A8MWK0 482 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 IDH3BO43837 385 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 ZNF8P17098 575 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-208ENST00000543633 CSTF2P33240 577 aaKnown RBP eCLIP13.14□□□□□ -0.31
VPS33A-208ENST00000543633 HTR3AP46098 478 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 RPS5P46782 204 aaKnown RBP13.14□□□□□ -0.31
VPS33A-208ENST00000543633 PRIM2P49643 509 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 OR2B6P58173 313 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 HBA1P69905 142 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 DMC1Q14565 340 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 COX20Q5RI15 118 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 FRMPD2BQ6IN97 320 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 PTCHD4Q6ZW05 846 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 ARL14EPQ8N8R7 260 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-208ENST00000543633 CAPSLQ8WWF8 208 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 OPALINQ96PE5 141 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 OR4K3Q96R72 315 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 OR5M11Q96RB7 305 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 YIPF2Q9BWQ6 316 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 VN1R3Q9BXE9 311 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 TPK1Q9H3S4 243 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 RNF167Q9H6Y7 350 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 GULP1Q9UBP9 304 aa13.14□□□□□ -0.31
VPS33A-208ENST00000543633 MBD1Q9UIS9 605 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-208ENST00000543633 LSM2Q9Y333 95 aaKnown RBP13.14□□□□□ -0.31
VPS33A-208ENST00000543633 CENPBD1B2RD01 187 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 WASH3PC4AMC7 463 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 H3BQ06 376 aaPredicted RBP13.13□□□□□ -0.31
VPS33A-208ENST00000543633 ZNF197O14709 1029 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 OPN1SWP03999 348 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 IFNW1P05000 195 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 FURINP09958 794 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 HSMCR30P0CW71 290 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 VIPR1P32241 457 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 CD70P32970 193 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 DDOSTP39656 456 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 SLC7A9P82251 487 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 GPR50Q13585 617 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 GPNMBQ14956 572 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 MED22Q15528 200 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 SSX1Q16384 188 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 LRRC26Q2I0M4 334 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 SYTL3Q4VX76 610 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 ZNF770Q6IQ21 691 aaPredicted RBP13.13□□□□□ -0.31
VPS33A-208ENST00000543633 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 SLCO4C1Q6ZQN7 724 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 RFLNAQ6ZTI6 216 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 IKBIPQ70UQ0 350 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
VPS33A-208ENST00000543633 LAS2Q8IYD9 372 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 TCEAL8Q8IYN2 117 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 NLGN4XQ8N0W4 816 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 TRAM1L1Q8N609 369 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 FAM181AQ8N9Y4 354 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 WDR36Q8NI36 951 aaKnown RBP13.13□□□□□ -0.31
VPS33A-208ENST00000543633 PPCDCQ96CD2 204 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 IGSF21Q96ID5 467 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 OR2A14Q96R47 310 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 EFCAB11Q9BUY7 163 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 CRISPLD2Q9H0B8 497 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 IL21Q9HBE4 155 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 TAS2R9Q9NYW1 312 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 TBC1D24Q9ULP9 559 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 RBMX2Q9Y388 322 aaKnown RBP13.13□□□□□ -0.31
VPS33A-208ENST00000543633 KCNE2Q9Y6J6 123 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 IQCMA0A1B0GVH7 501 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 C6orf47O95873 294 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 SOD2P04179 222 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 RB1P06400 928 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 ITGB7P26010 798 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 IMPA1P29218 277 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 TNFSF8P32971 234 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 RPS13P62277 151 aaKnown RBP13.13□□□□□ -0.31
VPS33A-208ENST00000543633 RAB33AQ14088 237 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 NCF4Q15080 339 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 SOWAHCQ53LP3 525 aaPredicted RBP13.13□□□□□ -0.31
VPS33A-208ENST00000543633 FAM71E1Q6IPT2 247 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 BRAT1Q6PJG6 821 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 ANGPTL8Q6UXH0 198 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 CELF2-AS1Q8N7Q2 184 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 AQP11Q8NBQ7 271 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 OR52J3Q8NH60 311 aa13.13□□□□□ -0.31
VPS33A-208ENST00000543633 KLHL6Q8WZ60 621 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms