RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PTDSS1P48651 473 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 CHN2P52757 468 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 PPP3R1P63098 170 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 RASGEF1BQ0VAM2 473 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 DOC2AQ14183 400 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 LIPJQ5W064 366 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 DNM1P34Q6PK57 102 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 LRRC69Q6ZNQ3 347 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 ANKRD33Q7Z3H0 272 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 GPR65Q8IYL9 337 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM130Q8N3G9 435 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 NPWQ8N729 165 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 AKR7LQ8NHP1 331 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 NAT14Q8WUY8 206 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 TLCD1Q96CP7 247 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF570Q96NI8 536 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 POLR2J3Q9H1A7 115 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 OAS3Q9Y6K5 1087 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 PRSS51A0A1B0GVH4 220 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 IQCMA0A1B0GVH7 501 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 RSL1D1O76021 490 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 DBTP11182 482 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CD6P30203 668 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 GGT5P36269 586 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CDK6Q00534 326 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 NIPAL4Q0D2K0 466 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 TAB1Q15750 504 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM198Q66K66 360 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 TCEAL6Q6IPX3 200 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 NPAS3Q8IXF0 933 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 NAT6Q93015 286 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 RANBP9Q96S59 729 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 C15orf41Q9Y2V0 281 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 AP4B1Q9Y6B7 739 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 SLX4Q8IY92 1834 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 XKP51811 444 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 GPX6P59796 221 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 LSM3P62310 102 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 C19orf57Q0VDD7 668 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CAMK1Q14012 370 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 HERC3Q15034 1050 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 DUOXA1Q1HG43 343 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 SPATC1Q76KD6 591 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 DCP2Q8IU60 420 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 EZH1Q92800 747 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 UBXN10Q96LJ8 280 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 LPAR4Q99677 370 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 DUSP23Q9BVJ7 150 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 MRPL15Q9P015 296 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ZFR2Q9UPR6 939 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ERVK-19Q9WJR5 959 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 RGPD1P0DJD0 1748 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM149AA5PLN7 773 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 LATO43561 262 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 RBMXL2O75526 392 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 THRBP10828 461 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CD38P28907 300 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 OTX2P32243 289 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 DGKQP52824 942 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 GUCA2AQ02747 115 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC10A2Q12908 348 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 PDK3Q15120 406 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 DEFB133Q30KQ1 61 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CRB2Q5IJ48 1285 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM240Q5SV17 173 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ANKRD54Q6NXT1 300 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF761Q86XN6 746 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM47BQ8NA70 645 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 HTRA1Q92743 480 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 SH3YL1Q96HL8 342 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 APOOQ9BUR5 198 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 COMMD4Q9H0A8 199 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ZBP1Q9H171 429 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 DIABLOQ9NR28 239 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 WBP1LQ9NX94 342 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 NPIPA5E9PKD4 350 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 TMX2-CTNND1H3BSU7 103 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CASKO14936 926 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 POLR1CO15160 346 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 SMPD2O60906 423 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CNOT4O95628 575 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 FESP07332 822 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 MYOGP15173 224 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 IDUAP35475 653 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ARSFP54793 590 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 LRP8Q14114 963 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 FGL2Q14314 439 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 SMU1Q2TAY7 513 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CYP27C1Q4G0S4 372 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 PDCD4Q53EL6 469 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 KLHL26Q53HC5 615 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 RNF111Q6ZNA4 994 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 NLRC3Q7RTR2 1065 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 OR5L2Q8NGL0 311 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 THAP3Q8WTV1 239 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM234Q8WY98 164 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ATOH1Q92858 354 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ADIPOR1Q96A54 375 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 SAT2Q96F10 170 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms