RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 MAPK9P45984 424 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 PREPP48147 710 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ALDH9A1P49189 494 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 POLR2LP62875 67 aaKnown RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 IFITM2Q01629 132 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ZNF648Q5T619 568 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 SLX4IPQ5VYV7 408 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 PLAG1Q6DJT9 500 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ZNF770Q6IQ21 691 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 TRIM40Q6P9F5 258 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 GDPD4Q6W3E5 623 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 Q6ZVU0 165 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ARMCX6Q7L4S7 300 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 COMMD6Q7Z4G1 85 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 TMPRSS11BQ86T26 416 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 SLC44A2Q8IWA5 706 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 CMTM8Q8IZV2 173 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 CELF2-AS1Q8N7Q2 184 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 AQP11Q8NBQ7 271 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 NEIL2Q969S2 332 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 GTPBP3Q969Y2 492 aaKnown RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 CIDECQ96AQ7 238 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 TMEM159Q96B96 161 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ZNF486Q96H40 463 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 OPALINQ96PE5 141 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 TRNT1Q96Q11 434 aaKnown RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 NUAK2Q9H093 628 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 FZD3Q9NPG1 666 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 DMRT3Q9NQL9 472 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 CLN6Q9NWW5 311 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ANGPT4Q9Y264 503 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 FOXE1O00358 373 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 RGS13O14921 159 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 GRM6O15303 877 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 GPX5O75715 221 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 GADD45GO95257 159 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 RHCEP18577 417 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 MAGP20916 626 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ENDOUP21128 410 aaKnown RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 GABRR2P28476 465 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 PRIM2P49643 509 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 PRLHRP49683 370 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 CTSCP53634 463 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 CRISP1P54107 249 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 SF3B4Q15427 424 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 NDUFA5Q16718 116 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 CYP27C1Q4G0S4 372 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 AGAP6Q5VW22 663 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ASTLQ6HA08 431 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 FAM71E1Q6IPT2 247 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 BRAT1Q6PJG6 821 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 RNF130Q86XS8 419 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 SLC30A8Q8IWU4 369 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 LAS2Q8IYD9 372 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 LILRA3Q8N6C8 439 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 MRPS31Q92665 395 aaKnown RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 PPCDCQ96CD2 204 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 AGAP4Q96P64 663 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 ROGDIQ9GZN7 287 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 NMNAT1Q9HAN9 279 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 RC3H2Q9HBD1 1191 aaKnown RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 SLC25A19Q9HC21 320 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 SMURF1Q9HCE7 757 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 CRNNQ9UBG3 495 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 LSM2Q9Y333 95 aaKnown RBP12.37□□□□□ -0.43
PTCD2-212ENST00000543322 KCNE2Q9Y6J6 123 aa12.37□□□□□ -0.43
PTCD2-212ENST00000543322 DOCK6Q96HP0 2047 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 H3BQ06 376 aaPredicted RBP12.36□□□□□ -0.43
PTCD2-212ENST00000543322 PSMD11O00231 422 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 SSX4O60224 188 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 KLHL18O94889 574 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 APOA1P02647 267 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 POU2F1P14859 743 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 S100A1P23297 94 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 RCVRNP35243 200 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 CHI3L1P36222 383 aaPredicted RBP12.36□□□□□ -0.43
PTCD2-212ENST00000543322 ETV3P41162 512 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 NR4A2P43354 598 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 NKX2-5P52952 324 aaPredicted RBP12.36□□□□□ -0.43
PTCD2-212ENST00000543322 MC1RQ01726 317 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 RHAGQ02094 409 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 DMC1Q14565 340 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 MED22Q15528 200 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 SLC5A12Q1EHB4 618 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 Q6ZVL8 140 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 PTCHD4Q6ZW05 846 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 RASGEF1AQ8N9B8 481 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 WDR36Q8NI36 951 aaKnown RBP12.36□□□□□ -0.43
PTCD2-212ENST00000543322 WDR48Q8TAF3 677 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 C16orf78Q8WTQ4 265 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 APOBEC4Q8WW27 367 aaKnown RBP12.36□□□□□ -0.43
PTCD2-212ENST00000543322 MTERF3Q96E29 417 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 SLC30A2Q9BRI3 323 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 WRAP53Q9BUR4 548 aaKnown RBP12.36□□□□□ -0.43
PTCD2-212ENST00000543322 RIOK2Q9BVS4 552 aaKnown RBP12.36□□□□□ -0.43
PTCD2-212ENST00000543322 C3orf14Q9HBI5 128 aa12.36□□□□□ -0.43
PTCD2-212ENST00000543322 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms