RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SGK2Q9HBY8 427 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CPNE5Q9HCH3 593 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PAK6Q9NQU5 681 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 C1GALT1Q9NS00 363 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF226Q9NYT6 803 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 SPG21Q9NZD8 308 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CCDC59Q9P031 241 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 SPASTQ9UBP0 616 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC25A13Q9UJS0 675 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PAIP2BQ9ULR5 123 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 POFUT2Q9Y2G5 429 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 TSC22D4Q9Y3Q8 395 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PCDHGA3Q9Y5H0 932 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 LTBP2Q14767 1821 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ARRDC5A6NEK1 342 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 MGAT4DA6NG13 374 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 AGAP5A6NIR3 686 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 DSCR3O14972 297 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 KLF4O43474 513 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 TGM5O43548 720 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 TSPAN6O43657 245 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 AIREO43918 545 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 CNOT3O75175 753 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 UPK1BO75841 260 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC16A8O95907 504 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 FURINP09958 794 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 PABPC1P11940 636 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ETFAP13804 333 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 NPPBP16860 134 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 LAG3P18627 525 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 POLR2EP19388 210 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 GADD45AP24522 165 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 C21orf33P30042 268 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 GRK5P34947 590 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 TGFBR1P36897 503 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ETV3P41162 512 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ETV6P41212 452 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 XCR1P46094 333 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 BDKRB1P46663 353 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 SOX9P48436 509 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 RPS13P62277 151 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 HBA1P69905 142 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 CD300CQ08708 224 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF763Q0D2J5 394 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 DDX39BQ13838 428 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 EIF4HQ15056 248 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 CCDC85BQ15834 202 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 TIGD6Q17RP2 521 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 MPEG1Q2M385 716 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF181Q2M3W8 571 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF404Q494X3 552 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 LRRC73Q5JTD7 316 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 GCNT6Q5T4J0 391 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF648Q5T619 568 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 FAM71E1Q6IPT2 247 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 MED27Q6P2C8 311 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 CNKSR3Q6P9H4 555 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF852Q6ZMS4 543 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 LRRC69Q6ZNQ3 347 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 Q6ZPB1 254 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 NCCRP1Q6ZVX7 275 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 USP43Q70EL4 1123 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 DPPA4Q7L190 304 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ARMCX6Q7L4S7 300 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ANKRD33Q7Z3H0 272 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM25Q86YD3 366 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 SNX29P2Q8IUI4 249 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 PLD3Q8IV08 490 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 P3H2Q8IVL5 708 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 RAVER1Q8IY67 606 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 LRRC56Q8IYG6 542 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF513Q8N8E2 541 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 OR4A15Q8NGL6 344 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 HCAR2Q8TDS4 363 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 CHAC2Q8WUX2 184 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 GLYATL1Q969I3 302 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 NEIL2Q969S2 332 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM159Q96B96 161 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 REPS1Q96D71 796 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 MTERF3Q96E29 417 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ZHX1-C8orf76Q96EF9 292 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 PAWRQ96IZ0 340 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 MRGPRX3Q96LB0 322 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 SAMD11Q96NU1 681 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 COL21A1Q96P44 957 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 HEPHQ9BQS7 1158 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 CCM2Q9BSQ5 444 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 RIOK2Q9BVS4 552 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 CDADC1Q9BWV3 514 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 SGPP1Q9BX95 441 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 CDCA4Q9BXL8 241 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 EHD1Q9H4M9 534 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 EPHX3Q9H6B9 360 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 RUBCNLQ9H714 662 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 MYNNQ9NPC7 610 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ACER3Q9NUN7 267 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 RLIMQ9NVW2 624 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 ANKMY1Q9P2S6 941 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 DKK3Q9UBP4 350 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms