RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 WASHC1A8K0Z3 465 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 PLPP1O14494 284 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 UBFD1O14562 309 aaKnown RBP9.14□□□□□ -0.95
YBX3-212ENST00000542002 SLC28A2O43868 658 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 MAN1A2O60476 641 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 PRMT3O60678 531 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 UGDHO60701 494 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 PROCP04070 461 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 GSTA1P08263 222 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 ITGAMP11215 1152 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 RNH1P13489 461 aaKnown RBP9.14□□□□□ -0.95
YBX3-212ENST00000542002 CREB1P16220 341 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 KRT15P19012 456 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 ATP5F1P24539 256 aaPredicted RBP9.14□□□□□ -0.95
YBX3-212ENST00000542002 PPP2R1BP30154 601 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 CRHR1P34998 444 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 BSGP35613 385 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 DEKP35659 375 aaKnown RBP9.14□□□□□ -0.95
YBX3-212ENST00000542002 CASRP41180 1078 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 PIK3CBP42338 1070 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 CCNG1P51959 295 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 MTTPP55157 894 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 MLLT10P55197 1068 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 HERVK_113P63132 956 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 SLC18A2Q05940 514 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 KLRB1Q12918 225 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 IGFBP7Q16270 282 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 TMEM35AQ53FP2 167 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 SFT2D3Q587I9 215 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 VWA5B1Q5TIE3 1220 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 B3GNTL1Q67FW5 361 aaPredicted RBP9.14□□□□□ -0.95
YBX3-212ENST00000542002 OR4C11Q6IEV9 310 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 JMJD6Q6NYC1 403 aaPredicted RBP9.14□□□□□ -0.95
YBX3-212ENST00000542002 TRIM40Q6P9F5 258 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 EMBQ6PCB8 327 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 IGFL2Q6UWQ7 119 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 IGFL3Q6UXB1 125 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 MILR1Q7Z6M3 343 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 LCA5Q86VQ0 697 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 KBTBD2Q8IY47 623 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 C4orf33Q8N1A6 199 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 FAM47BQ8NA70 645 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 TEX19Q8NA77 164 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 CATSPER1Q8NEC5 780 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 BRIX1Q8TDN6 353 aaKnown RBP9.14□□□□□ -0.95
YBX3-212ENST00000542002 TRPC4APQ8TEL6 797 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 METTL21AQ8WXB1 218 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 UCN3Q969E3 161 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 ATP6V1E2Q96A05 226 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 CMTM7Q96FZ5 175 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 PTCHD1Q96NR3 888 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 SERINC2Q96SA4 455 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 NPLQ9BXD5 320 aaPredicted RBP9.14□□□□□ -0.95
YBX3-212ENST00000542002 ERVK-6Q9BXR3 956 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 TRIM4Q9C037 500 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 LUZP4Q9P127 313 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 DAPP1Q9UN19 280 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 ZNF451Q9Y4E5 1061 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 PCDHGA11Q9Y5H2 935 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 TCRBV16S1A1N1A0A5B0 115 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 A8MUA0 341 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 FOXE1O00358 373 aaPredicted RBP9.13□□□□□ -0.95
YBX3-212ENST00000542002 B3GALT2O43825 422 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 PLIN3O60664 434 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 CDH16O75309 829 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 EEDO75530 441 aaKnown RBP9.13□□□□□ -0.95
YBX3-212ENST00000542002 SUPT7LO94864 414 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 SCELO95171 688 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 SERPINA7P05543 415 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 HIST1H1TP22492 207 aaPredicted RBP9.13□□□□□ -0.95
YBX3-212ENST00000542002 PTX3P26022 381 aaPredicted RBP9.13□□□□□ -0.95
YBX3-212ENST00000542002 SOX11P35716 441 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 ST13P50502 369 aaKnown RBP9.13□□□□□ -0.95
YBX3-212ENST00000542002 RAB38P57729 211 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 OR4D2P58180 307 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 TLE1Q04724 770 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 CLCQ05315 142 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 SLAMF1Q13291 335 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 SGO1Q5FBB7 561 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 TCHHL1Q5QJ38 904 aaPredicted RBP9.13□□□□□ -0.95
YBX3-212ENST00000542002 AGAP7PQ5VUJ5 663 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 FRG2Q64ET8 278 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 SLC6A19Q695T7 634 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 NIPAL1Q6NVV3 410 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 ZYG11AQ6WRX3 759 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 QSOX2Q6ZRP7 698 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 LINC00696Q6ZRV3 163 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 CHSY3Q70JA7 882 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 TRABD2AQ86V40 505 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 SCUBE1Q8IWY4 988 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 MREGQ8N565 214 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 SIRT6Q8N6T7 355 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 NFAM1Q8NET5 270 aaPredicted RBP9.13□□□□□ -0.95
YBX3-212ENST00000542002 RGMAQ96B86 450 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 L3HYPDHQ96EM0 354 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 AGAP4Q96P64 663 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 KCNC2Q96PR1 638 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 FRG2BQ96QU4 278 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 NPAS2Q99743 824 aa9.13□□□□□ -0.95
YBX3-212ENST00000542002 TBCDQ9BTW9 1192 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms