RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 SPNP16150 400 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 IMPA1P29218 277 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 WASP42768 502 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 GPR1P46091 355 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 PRLHRP49683 370 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 FOXD4Q12950 439 aaPredicted RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 CSTF3Q12996 717 aaKnown RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 ZNF181Q2M3W8 571 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 ZNF362Q5T0B9 420 aaPredicted RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 CPTPQ5TA50 214 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 TMPRSS11BQ86T26 416 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SAMD11Q96NU1 681 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 NIPSNAP1Q9BPW8 284 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 CDADC1Q9BWV3 514 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 QPCTLQ9NXS2 382 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SPASTQ9UBP0 616 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 RUVBL1Q9Y265 456 aaKnown RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 PADI2Q9Y2J8 665 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 TMEM98Q9Y2Y6 226 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 CAB39Q9Y376 341 aaPredicted RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 TSPAN11A1L157 253 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SERTM1A2A2V5 107 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 TBC1D3BA6NDS4 549 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 TAF4O00268 1085 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SRPRAP08240 638 aaKnown RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 HSMCR30P0CW71 290 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 C6P13671 934 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 LBX1P52954 281 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 CYP27C1Q4G0S4 372 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 C9orf64Q5T6V5 341 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 ATAD3BQ5T9A4 648 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SLC46A3Q7Z3Q1 461 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 PARP16Q8N5Y8 322 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 C1orf52Q8N6N3 182 aaKnown RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 OR10G2Q8NGC3 310 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 UTP15Q8TED0 518 aaKnown RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 STARD8Q92502 1023 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 NEIL2Q969S2 332 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 DTD2Q96FN9 168 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 FOPNLQ96NB1 174 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 IGFLR1Q9H665 355 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 ITM2CQ9NQX7 267 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SPATA6Q9NWH7 488 aaPredicted RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 ITGB1BP2Q9UKP3 347 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SH2B3Q9UQQ2 575 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SLC5A10A0PJK1 596 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 SNPHO15079 494 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 SOD1P00441 154 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 PTHP01270 115 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 DNTTP04053 509 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 RPLP0P05388 317 aaKnown RBP11.98□□□□□ -0.49
RNF4-222ENST00000541204 ANXA4P09525 319 aaPredicted RBP11.98□□□□□ -0.49
RNF4-222ENST00000541204 ADORA3P0DMS8 318 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 CRATP43155 626 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 SELENOWP63302 87 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 RAE1P78406 368 aaKnown RBP11.98□□□□□ -0.49
RNF4-222ENST00000541204 ZNF234Q14588 700 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 COX20Q5RI15 118 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 LIPJQ5W064 366 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 NPAS3Q8IXF0 933 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 AMER2Q8N7J2 671 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 FGF13Q92913 245 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 NUS1Q96E22 293 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 Q96MT0 163 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 CHCHD6Q9BRQ6 235 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 CENPOQ9BU64 300 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 PLCXD1Q9NUJ7 323 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 ZNF226Q9NYT6 803 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 TAS2R16Q9NYV7 291 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 SH3BP4Q9P0V3 963 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 DKK3Q9UBP4 350 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 PLAGL1Q9UM63 463 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 SLC6A14Q9UN76 642 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 DPM1O60762 260 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 PRNPP04156 253 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 POU2F1P14859 743 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 NKX2-5P52952 324 aaPredicted RBP11.98□□□□□ -0.49
RNF4-222ENST00000541204 CDH12P55289 794 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 SPIBQ01892 262 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 GPM6BQ13491 265 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 BCL2A1Q16548 175 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 ZNF852Q6ZMS4 543 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 AKAP14Q86UN6 197 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 HEATR4Q86WZ0 1026 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 SLC7A5P1Q8MH63 180 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 STX19Q8N4C7 294 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 OR4A15Q8NGL6 344 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 C11orf24Q96F05 449 aaPredicted RBP11.98□□□□□ -0.49
RNF4-222ENST00000541204 PCDHGA2Q9Y5H1 932 aa11.98□□□□□ -0.49
RNF4-222ENST00000541204 PCYT1BQ9Y5K3 369 aaPredicted RBP11.98□□□□□ -0.49
RNF4-222ENST00000541204 CFAP20Q9Y6A4 193 aaKnown RBP11.98□□□□□ -0.49
RNF4-222ENST00000541204 MTCL1Q9Y4B5 1905 aaKnown RBP11.98□□□□□ -0.49
RNF4-222ENST00000541204 MYO9BQ13459 2157 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 SAGE2PA6NJ88 616 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 ETFAP13804 333 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 ADRB3P13945 408 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 PCSK2P16519 638 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 ALOX12P18054 663 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 S100A5P33763 92 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms