RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 PDE9AO76083 593 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 MYO1DO94832 1006 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 HAUS5O94927 633 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 OR6B1O95007 311 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 ZWINTO95229 277 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 H2AFXP16104 143 aaPredicted RBP6.78□□□□□ -1.32
YBX3-209ENST00000540747 PAMP19021 973 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 ENDOUP21128 410 aaKnown RBP6.78□□□□□ -1.32
YBX3-209ENST00000540747 GABRB3P28472 473 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 PPP2R1BP30154 601 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 GRK3P35626 688 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 KCNJ1P48048 391 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 SSR4P51571 173 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 HNRNPFP52597 415 aaKnown RBP6.78□□□□□ -1.32
YBX3-209ENST00000540747 CDKN2DP55273 166 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 PPIAP62937 165 aaKnown RBP6.78□□□□□ -1.32
YBX3-209ENST00000540747 SKP1P63208 163 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 ADAM8P78325 824 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 MYBPHQ13203 477 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 SLC25A35Q3KQZ1 300 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 BBS9Q3SYG4 887 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 XKR6Q5GH73 641 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 CATSPEREQ5SY80 951 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 TEX35Q5T0J7 233 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 DUPD1Q68J44 220 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 UGT3A1Q6NUS8 523 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 C16orf47Q6ZP98 133 aaPredicted RBP6.78□□□□□ -1.32
YBX3-209ENST00000540747 RGS9BPQ6ZS82 235 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 TRILQ7L0X0 811 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 ABHD13Q7L211 337 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 CLYBLQ8N0X4 340 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 CYP4X1Q8N118 509 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 TMEM52Q8NDY8 209 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 MCUQ8NE86 351 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 OR5M3Q8NGP4 307 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 NEIL2Q969S2 332 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 NCLNQ969V3 563 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 FBXL8Q96CD0 374 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 VMP1Q96GC9 406 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 SNF8Q96H20 258 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 SIGLEC10Q96LC7 697 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 SERPINB12Q96P63 405 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 TTTY12Q9BZ98 90 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 DEFB127Q9H1M4 99 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 KLHL31Q9H511 634 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 SH2D2AQ9NP31 389 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 TIMMDC1Q9NPL8 285 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 LZTFL1Q9NQ48 299 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 RASSF1Q9NS23 344 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 KCMF1Q9P0J7 381 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 FBXO5Q9UKT4 447 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 YARS2Q9Y2Z4 477 aaKnown RBP6.78□□□□□ -1.32
YBX3-209ENST00000540747 MAGEB16A2A368 324 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 SDR42E2A6NKP2 422 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 FIGNL2A6NMB9 653 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 FAM166BA8MTA8 275 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 A8MUA0 341 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 AQP7O14520 342 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 SUSD5O60279 629 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 OR2J2O76002 312 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 TBX6O95947 436 aaPredicted RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 SERPINA6P08185 405 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 CELA3AP09093 270 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 SOX3P41225 446 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 ZFP36L2P47974 494 aaKnown RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 AP1S2P56377 157 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 HSD17B7P56937 341 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 RAB8AP61006 207 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 RGS1Q08116 209 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 DMTNQ08495 405 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 THOC5Q13769 683 aaKnown RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 RUNX2Q13950 521 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 CEBPEQ15744 281 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 PPP1R3AQ16821 1122 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 FBXL19-AS1Q494R0 122 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 RBM20Q5T481 1227 aaKnown RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 RIPPLY2Q5TAB7 128 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 NDUFAF5Q5TEU4 345 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 TTC27Q6P3X3 843 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 POMZP3Q6PJE2 187 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 ADGRD1Q6QNK2 874 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 PAQR3Q6TCH7 311 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 SBSNQ6UWP8 590 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 ARSKQ6UWY0 536 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 PAMR1Q6UXH9 720 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 B3GNT6Q6ZMB0 384 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 SEM1Q6ZVN7 128 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 ZNF771Q7L3S4 317 aaPredicted RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 CDC20BQ86Y33 519 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 CNTN4Q8IWV2 1026 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 ZZZ3Q8IYH5 903 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 TXLNBQ8N3L3 684 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 FAM109AQ8N4B1 249 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 TMEM156Q8N614 296 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 TMEM251Q8N6I4 163 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 C2CD4AQ8NCU7 369 aaPredicted RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 OR5M9Q8NGP3 310 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 SLC5A11Q8WWX8 675 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 PYCR2Q96C36 320 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms