RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CCDC88CQ9P219 2028 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 COL6A6A6NMZ7 2263 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 LOC100653049A0A140TA62 436 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 FITM1A5D6W6 292 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 MAGEB17A8MXT2 336 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 B2RBV5 119 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 TMEM150CB9EJG8 249 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 H7BY64 318 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 HAT1O14929 419 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 ATXN7O15265 892 aaPredicted RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 KRT34O76011 436 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 STK17BO94768 372 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 TBX6O95947 436 aaPredicted RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 CTSBP07858 339 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 G6PDP11413 515 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 NQO1P15559 274 aaKnown RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 ZNF28P17035 718 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 JAK1P23458 1154 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 IL12AP29459 219 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 PIK3CBP42338 1070 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 CCR8P51685 355 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 MNAT1P51948 309 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 PCBP4P57723 403 aaKnown RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 MEF2AQ02078 507 aaPredicted RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 TBL3Q12788 808 aaKnown RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 HIST2H2ACQ16777 129 aaPredicted RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 DEFB110Q30KQ9 67 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 TCTE1Q5JU00 501 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 IL23RQ5VWK5 629 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 HIST2H2AA3Q6FI13 130 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 CYP20A1Q6UW02 462 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 KRT78Q8N1N4 520 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 PROKR1Q8TCW9 393 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 TSPEARQ8WU66 669 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 SLC45A3Q96JT2 553 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 TEX37Q96LM6 180 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 LRFN5Q96NI6 719 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 PRAP1Q96NZ9 151 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 OR2A5Q96R48 311 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 MTERF1Q99551 399 aaKnown RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 ZFYVE21Q9BQ24 234 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 AIF1LQ9BQI0 150 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 CADM1Q9BY67 442 aaKnown RBP10.07□□□□□ -0.8
ATL3-204ENST00000540699 SIRT5Q9NXA8 310 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 CCDC167Q9P0B6 97 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 VPS29Q9UBQ0 182 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 TMED5Q9Y3A6 229 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 AP1M2Q9Y6Q5 423 aa10.07□□□□□ -0.8
ATL3-204ENST00000540699 TRBC2A0A5B9 178 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 H0YGG7 62 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 STMND1H3BQB6 276 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 FBP2O00757 339 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 GSC2O15499 205 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 SEC22BO75396 215 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 SCRG1O75711 98 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 C1QL1O75973 258 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 OR2B3O76000 313 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 PRB1P04280 392 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 SNRPB2P08579 225 aaKnown RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 LIPCP11150 499 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 PCNAP12004 261 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 BCKDHAP12694 445 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 ITGAXP20702 1163 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 CAPN3P20807 821 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 CXCR2P25025 360 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 SERPINB1P30740 379 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 RORAP35398 523 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 EMP3P54852 163 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 NME5P56597 212 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 ARF3P61204 181 aaPredicted RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 UFM1P61960 85 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 RPS15AP62244 130 aaKnown RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 RPS13P62277 151 aaKnown RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 RAE1P78406 368 aaKnown RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 RCAN2Q14206 197 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 PRTGQ2VWP7 1150 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 YOD1Q5VVQ6 348 aaPredicted RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 REP15Q6BDI9 236 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 FRMPD2BQ6IN97 320 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 TLDC1Q6P9B6 456 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 BLOC1S3Q6QNY0 202 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 TMIGD1Q6UXZ0 262 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 ZNF517Q6ZMY9 492 aaPredicted RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 TIPARPQ7Z3E1 657 aaKnown RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 ZNF605Q86T29 641 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 SPACA3Q8IXA5 215 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATL3-204ENST00000540699 ARHGEF39Q8N4T4 335 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 ANKRD53Q8N9V6 530 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 ZNF248Q8NDW4 579 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 CHTF18Q8WVB6 975 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 RCN3Q96D15 328 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 SLC25A23Q9BV35 468 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 ULBP3Q9BZM4 244 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 SPRTNQ9H040 489 aaPredicted RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 ADGRE2Q9UHX3 823 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 EIF3LQ9Y262 564 aaKnown RBP10.06□□□□□ -0.8
ATL3-204ENST00000540699 DLGAP4Q9Y2H0 992 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms