RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 MMACHCQ9Y4U1 282 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 FN1P02751 2386 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 A0A0G2JMM0 328 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 A0A1W2PPB8 328 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 A0A1W2PRS3 328 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 CTAGE9A4FU28 777 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 HSPB2A8KAH6 182 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 KIR3DP1A8MWS1 328 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 EIF3FO00303 357 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 PRKNO60260 465 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 OR6B1O95007 311 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 FTCDO95954 541 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 SMIM10L1P0DMW3 83 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 PAMP19021 973 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 MAGEA5P43359 124 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 RAB8AP61006 207 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 BASP1P80723 227 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 RGS1Q08116 209 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 HSPB2Q16082 182 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 HYAL4Q2M3T9 481 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 ZNF750Q32MQ0 723 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 HECTD2Q5U5R9 776 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 CD200R1Q8TD46 325 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 RNASE6Q93091 150 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 NCLNQ969V3 563 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 TRIM44Q96DX7 344 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 SNF8Q96H20 258 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 SMIM10Q96HG1 83 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 GPR21Q99679 349 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 SH3GL2Q99962 352 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 LDAHQ9H6V9 325 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 LIN28AQ9H9Z2 209 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 PARVBQ9HBI1 364 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 PNO1Q9NRX1 252 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 SAMD15Q9P1V8 674 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 MYOTQ9UBF9 498 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 ADAMTS6Q9UKP5 1117 aa10.78□□□□□ -0.68
CLSTN3-209ENST00000539982 ATP6AP2A0A1C7CYW4 349 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 URADA6NGE7 173 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 G3V3Y1 287 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 HCN1O60741 890 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 AVILO75366 819 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 ATP6AP2O75787 350 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 C8GP07360 202 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 CELA3AP09093 270 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 EPXP11678 715 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 AHRP35869 848 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 SOX3P41225 446 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 HNF4AP41235 474 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 CDK16Q00536 496 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 FOXO1Q12778 655 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 CTBP1Q13363 440 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 FBXL19-AS1Q494R0 122 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 SHEQ5VZ18 495 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 ARMC3Q5W041 872 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 FBXW10Q5XX13 1052 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 ZNF470Q6ECI4 717 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 LRRC8EQ6NSJ5 796 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 MBOAT1Q6ZNC8 495 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 RTL4Q6ZR62 310 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 SLC13A5Q86YT5 568 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 DENND6AQ8IWF6 608 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 PALM2Q8IXS6 379 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 CA13Q8N1Q1 262 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 RASL10BQ96S79 203 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 ZNF395Q9H8N7 513 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 PLEKHF2Q9H8W4 249 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 FBXO6Q9NRD1 293 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 FOXD3Q9UJU5 478 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 PCDHGB3Q9Y5G1 929 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 COMMD10Q9Y6G5 202 aa10.77□□□□□ -0.69
CLSTN3-209ENST00000539982 TRGV5A0A0B4J1U4 118 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 TUBAL3A6NHL2 446 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 WWP2O00308 870 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 DVL2O14641 736 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 LY6G6DO95868 133 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 F7P08709 466 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 HIST1H2AGP0C0S8 130 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 HIST1H2ADP20671 130 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 PPP2R1BP30154 601 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 SCTRP47872 440 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 ASCL1P50553 236 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 HSD17B7P56937 341 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 NKX6-1P78426 367 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 SP140Q13342 867 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 THOC5Q13769 683 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 BMPR2Q13873 1038 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 DHX34Q14147 1143 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 CSHL1Q14406 222 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 BBS9Q3SYG4 887 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 CATSPEREQ5SY80 951 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 SEL1L2Q5TEA6 688 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 DUPD1Q68J44 220 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 HSDL2Q6YN16 418 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 FAM47EQ6ZV65 393 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 SEM1Q6ZVN7 128 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 KRTAP1-3Q8IUG1 177 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 SCUBE1Q8IWY4 988 aa10.76□□□□□ -0.69
CLSTN3-209ENST00000539982 GOLM1Q8NBJ4 401 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms