RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 WWOXQ9NZC7 414 aa14.04□□□□□ -0.16
USB1-203ENST00000539737 CD274Q9NZQ7 290 aa14.04□□□□□ -0.16
USB1-203ENST00000539737 SH2B3Q9UQQ2 575 aa14.04□□□□□ -0.16
USB1-203ENST00000539737 INTS1Q8N201 2190 aaKnown RBP14.04□□□□□ -0.16
USB1-203ENST00000539737 ZNF860A6NHJ4 632 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 NCF1BA6NI72 391 aaPredicted RBP14.03□□□□□ -0.16
USB1-203ENST00000539737 NCF1CA8MVU1 366 aaPredicted RBP14.03□□□□□ -0.16
USB1-203ENST00000539737 SUPT3HB4E1H0 165 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 H7BY64 318 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 ADAM10O14672 748 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 DNAJB6O75190 326 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 SUPT3HO75486 399 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 CDC123O75794 336 aaPredicted RBP14.03□□□□□ -0.16
USB1-203ENST00000539737 COL6A2P12110 1019 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 CDH1P12830 882 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 NCF1P14598 390 aaPredicted RBP14.03□□□□□ -0.16
USB1-203ENST00000539737 NPPBP16860 134 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 IL1RNP18510 177 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 SSTR2P30874 369 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 SLC6A12P48065 614 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 IRF9Q00978 393 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 ALDH6A1Q02252 535 aaKnown RBP14.03□□□□□ -0.16
USB1-203ENST00000539737 FAM53BQ14153 422 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 ACAP2Q15057 778 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 OR1C1Q15619 314 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 TSNAXIP1Q2TAA8 658 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.03□□□□□ -0.16
USB1-203ENST00000539737 ACER2Q5QJU3 275 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 GALNTL5Q7Z4T8 443 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 ISCA2Q86U28 154 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 THOC6Q86W42 341 aaKnown RBP14.03□□□□□ -0.16
USB1-203ENST00000539737 SIAH3Q8IW03 269 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 KIF2BQ8N4N8 673 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 ZCCHC10Q8TBK6 192 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 SLC5A11Q8WWX8 675 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 METTL21AQ8WXB1 218 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 EXT2Q93063 718 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 TSLPQ969D9 159 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 SDCCAG3Q96C92 435 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 NXNL1Q96CM4 212 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 FRMD6Q96NE9 622 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 PRAP1Q96NZ9 151 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 RNF32Q9H0A6 362 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 KCNK13Q9HB14 408 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.03□□□□□ -0.16
USB1-203ENST00000539737 ZNF835Q9Y2P0 537 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 HRH3Q9Y5N1 445 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 KCNE2Q9Y6J6 123 aa14.03□□□□□ -0.16
USB1-203ENST00000539737 V9GYY5 206 aaPredicted RBP14.03□□□□□ -0.16
USB1-203ENST00000539737 PRRC2AP48634 2157 aaKnown RBP14.03□□□□□ -0.16
USB1-203ENST00000539737 NKX2-6A6NCS4 301 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 SGK494L7N484 410 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 WDR47O94967 919 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 B3GALT4O96024 378 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 TUBBP07437 444 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 ICAM2P13598 275 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 GCAP28676 217 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 PTGER1P34995 402 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 GGT5P36269 586 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 GMPRP36959 345 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 CCR8P51685 355 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 SMSP52788 366 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 CASP6P55212 293 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 ERCC6LQ2NKX8 1250 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 RIPOR1Q6ZS17 1223 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 CPEB2Q7Z5Q1 589 aaKnown RBP14.02□□□□□ -0.17
USB1-203ENST00000539737 ANKRD37Q7Z713 158 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 DOLPP1Q86YN1 238 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 RPRMLQ8N4K4 120 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 CPSF7Q8N684 471 aaKnown RBP14.02□□□□□ -0.17
USB1-203ENST00000539737 CAMKVQ8NCB2 501 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 ABHD11Q8NFV4 315 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 AENQ8WTP8 325 aaKnown RBP14.02□□□□□ -0.17
USB1-203ENST00000539737 UBTD2Q8WUN7 234 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 OR4K3Q96R72 315 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 ATOH8Q96SQ7 321 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 TMEM79Q9BSE2 394 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 TUBB6Q9BUF5 446 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 CAPS2Q9BXY5 557 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 UCK2Q9BZX2 261 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 PELI2Q9HAT8 420 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 GPRC5BQ9NZH0 403 aa14.02□□□□□ -0.17
USB1-203ENST00000539737 FAM90A27PA6NNH2 459 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 H0YIG0 161 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 NADKO95544 446 aaPredicted RBP14.01□□□□□ -0.17
USB1-203ENST00000539737 SLC35G6P0C7Q6 338 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 ABOP16442 354 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 SKP1P63208 163 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 OC90Q02509 493 aaPredicted RBP14.01□□□□□ -0.17
USB1-203ENST00000539737 MTFR2Q6P444 385 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 TIFABQ6ZNK6 161 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 LRRC70Q7Z2Q7 622 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 VN1R4Q7Z5H5 301 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 LCA5Q86VQ0 697 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 MARVELD2Q8N4S9 558 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 CHTF18Q8WVB6 975 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 SREK1Q8WXA9 508 aaKnown RBP14.01□□□□□ -0.17
USB1-203ENST00000539737 CAVIN3Q969G5 261 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 NEIL2Q969S2 332 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 TGIF2Q9GZN2 237 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms