RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SATB2Q9UPW6 733 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 NSG2Q9Y328 171 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 ANHXE9PGG2 379 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 IFI35P80217 286 aaPredicted RBP3.29□□□□□ -1.88
CCDC7-209ENST00000539197 SULT2A1Q06520 285 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 CRMP1Q14194 572 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 FASTKQ14296 549 aaKnown RBP3.29□□□□□ -1.88
CCDC7-209ENST00000539197 GSG1Q2KHT4 349 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 MFSD4BQ5TF39 518 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 REP15Q6BDI9 236 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 COX8CQ7Z4L0 72 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 APCDD1Q8J025 514 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 LINC01006Q8NI28 216 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 PINK1Q9BXM7 581 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 SNX25Q9H3E2 840 aa3.29□□□□□ -1.88
CCDC7-209ENST00000539197 IARS2Q9NSE4 1012 aaKnown RBP3.29□□□□□ -1.88
CCDC7-209ENST00000539197 FOXI3A8MTJ6 420 aaPredicted RBP3.28□□□□□ -1.88
CCDC7-209ENST00000539197 E2F3O00716 465 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 ANGPTL1O95841 491 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 CD1EP15812 388 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 ZNF17P17021 662 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 ZNF133P52736 654 aaPredicted RBP3.28□□□□□ -1.88
CCDC7-209ENST00000539197 ZNF542PQ5EBM4 170 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 MFN1Q8IWA4 741 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 SLC26A7Q8TE54 656 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 PCNPQ8WW12 178 aaKnown RBP3.28□□□□□ -1.88
CCDC7-209ENST00000539197 HDAC11Q96DB2 347 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 EBF4Q9BQW3 602 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 PAXXQ9BUH6 204 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 ZBP1Q9H171 429 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 BCCIPQ9P287 314 aaKnown RBP eCLIP3.28□□□□□ -1.88
CCDC7-209ENST00000539197 RPS6KB2Q9UBS0 482 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 DBF4Q9UBU7 674 aaPredicted RBP3.28□□□□□ -1.88
CCDC7-209ENST00000539197 UBQLN2Q9UHD9 624 aa3.28□□□□□ -1.88
CCDC7-209ENST00000539197 ZNF853P0CG23 659 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 MYBL1P10243 752 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 ACHEP22303 614 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 SLC1A6P48664 564 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 RAB28P51157 221 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 BECN1Q14457 450 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 CELF3Q5SZQ8 465 aaKnown RBP3.27□□□□□ -1.89
CCDC7-209ENST00000539197 ERMARDQ5T6L9 678 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 TCEAL6Q6IPX3 200 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 ZNF544Q6NX49 715 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 MOXD1Q6UVY6 613 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 C15orf52Q6ZUT6 534 aaKnown RBP3.27□□□□□ -1.89
CCDC7-209ENST00000539197 NUFIP2Q7Z417 695 aaKnown RBP3.27□□□□□ -1.89
CCDC7-209ENST00000539197 UBQLNLQ8IYU4 475 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 BEST4Q8NFU0 473 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 CD99L2Q8TCZ2 262 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 P2RX5Q93086 422 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 ZBED6CLQ96FA7 236 aaPredicted RBP3.27□□□□□ -1.89
CCDC7-209ENST00000539197 ALKBH7Q9BT30 221 aaPredicted RBP3.27□□□□□ -1.89
CCDC7-209ENST00000539197 RPF1Q9H9Y2 349 aaKnown RBP3.27□□□□□ -1.89
CCDC7-209ENST00000539197 FBXO7Q9Y3I1 522 aa3.27□□□□□ -1.89
CCDC7-209ENST00000539197 ZNF487B1APH4 448 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 RSPH10B2B2RC85 870 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 LRRTM2O43300 516 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 PRAF2O60831 178 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 RSPH10BP0C881 870 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 AKR1B1P15121 316 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 HMGCLP35914 325 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 MDH2P40926 338 aaKnown RBP3.26□□□□□ -1.89
CCDC7-209ENST00000539197 ISXQ2M1V0 245 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 LIPJQ5W064 366 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 KRT80Q6KB66 452 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 ZCCHC12Q6PEW1 402 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 TIFABQ6ZNK6 161 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 TBC1D10CQ8IV04 446 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 SLF1Q9BQI6 1058 aa3.26□□□□□ -1.89
CCDC7-209ENST00000539197 HMGB1P1B2RPK0 211 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-209ENST00000539197 FRAT2O75474 233 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-209ENST00000539197 APBB3O95704 486 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 PENKP01210 267 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-209ENST00000539197 EEF2P13639 858 aaKnown RBP3.25□□□□□ -1.89
CCDC7-209ENST00000539197 CPT2P23786 658 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 RBBP4Q09028 425 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 AIMP1Q12904 312 aaKnown RBP3.25□□□□□ -1.89
CCDC7-209ENST00000539197 ABRAXAS2Q15018 415 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 CRY2Q49AN0 593 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 CST9LP1Q5W188 147 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 NEPROQ6NW34 567 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 OR6F1Q8NGZ6 308 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 MAGEB18Q96M61 343 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 NMUR1Q9HB89 426 aa3.25□□□□□ -1.89
CCDC7-209ENST00000539197 HBS1LQ9Y450 684 aaKnown RBP3.25□□□□□ -1.89
CCDC7-209ENST00000539197 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-209ENST00000539197 SLC33A1O00400 549 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-209ENST00000539197 DIAPH2O60879 1101 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 LUC7L3O95232 432 aaKnown RBP3.24□□□□□ -1.89
CCDC7-209ENST00000539197 GGPS1O95749 300 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 SKILP12757 684 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 GDF1P27539 372 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 SSTR1P30872 391 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 BACE1P56817 501 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 IL10RBQ08334 325 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 KIAA0040Q15053 153 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 LBHQ53QV2 105 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-209ENST00000539197 ENPP7Q6UWV6 458 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms