RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDCA3-207ENST00000538862 HCAR2Q8TDS4 363 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 UBE2FQ969M7 185 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 NXPE3Q969Y0 559 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 WDR34Q96EX3 536 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ASB16Q96NS5 453 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 NEURL2Q9BR09 285 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ITPAQ9BY32 194 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 ATAD3AQ9NVI7 634 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 NDUFAF4Q9P032 175 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 SH3BP4Q9P0V3 963 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 DKK3Q9UBP4 350 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 RNF6Q9Y252 685 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 LYVE1Q9Y5Y7 322 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 PMF1-BGLAPU3KQ54 211 aa13.94□□□□□ -0.18
CDCA3-207ENST00000538862 FOXE1O00358 373 aaPredicted RBP13.93□□□□□ -0.18
CDCA3-207ENST00000538862 TOR1BO14657 336 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 PCDH7O60245 1069 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 TNFRSF21O75509 655 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 NTRK1P04629 796 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 SRFP11831 508 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 CD36P16671 472 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 UGT2B10P36537 528 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 RPL3P39023 403 aaKnown RBP13.93□□□□□ -0.18
CDCA3-207ENST00000538862 NNMTP40261 264 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 PREPP48147 710 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 CCR3P51677 355 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 MVDP53602 400 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 NCS1P62166 190 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 RPS13P62277 151 aaKnown RBP13.93□□□□□ -0.18
CDCA3-207ENST00000538862 LSM3P62310 102 aaKnown RBP13.93□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM115Q12893 351 aaPredicted RBP13.93□□□□□ -0.18
CDCA3-207ENST00000538862 INAQ16352 499 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 PAGE2BQ5JRK9 111 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 ADNP2Q6IQ32 1131 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 DNASE1L2Q92874 299 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 MYDGFQ969H8 173 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 SLC38A4Q969I6 547 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 MAL2Q969L2 176 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 LRIG1Q96JA1 1093 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 COPS4Q9BT78 406 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 FAM8A1Q9UBU6 413 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 PSORS1C1Q9UIG5 152 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 OSGIN1Q9UJX0 560 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 DOLKQ9UPQ8 538 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 EXO1Q9UQ84 846 aaKnown RBP13.93□□□□□ -0.18
CDCA3-207ENST00000538862 PCM1Q15154 2024 aa13.93□□□□□ -0.18
CDCA3-207ENST00000538862 SERPINB7O75635 380 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 LCKP06239 509 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ALOX5P09917 674 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 BMP4P12644 408 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 TYRP14679 529 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ZNF8P17098 575 aaPredicted RBP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ITGA2P17301 1181 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 POLR2EP19388 210 aaKnown RBP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 XPAP23025 273 aaPredicted RBP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 DDX6P26196 483 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 CRATP43155 626 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ZNF763Q0D2J5 394 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 FCHO2Q0JRZ9 810 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 TBCEQ15813 527 aaPredicted RBP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 IFI44LQ53G44 452 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 CCDC92Q53HC0 331 aaPredicted RBP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ZNF805Q5CZA5 627 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 NRSN1Q8IZ57 195 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 FLCNQ8NFG4 579 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 OR52N2Q8NGI0 321 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 SPPL2AQ8TCT8 520 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 SMARCD2Q92925 531 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 NEIL2Q969S2 332 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 RSPRY1Q96DX4 576 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 FEVQ99581 238 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 EFCAB11Q9BUY7 163 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 BTBD2Q9BX70 525 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 SLIRPQ9GZT3 109 aaKnown RBP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM38AQ9H6F2 299 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 SPHK2Q9NRA0 654 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 THSD1Q9NS62 852 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 FKBP14Q9NWM8 211 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 POFUT2Q9Y2G5 429 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 KMT2EQ8IZD2 1858 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 NUP210Q8TEM1 1887 aaPredicted RBP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 KRBA1A5PL33 1030 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 EFCAB9A8MZ26 197 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 AQP1P29972 269 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ALDH4A1P30038 563 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 PDE7AQ13946 482 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ZNF385BQ569K4 471 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 GCNT6Q5T4J0 391 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM215Q68D42 235 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM220Q6QAJ8 160 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 BMP8AQ7Z5Y6 402 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 NLRP8Q86W28 1048 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 PLD3Q8IV08 490 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 IQCF2Q8IXL9 164 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 LAS2Q8IYD9 372 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 FBXL6Q8N531 539 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 LILRA3Q8N6C8 439 aaPredicted RBP13.92□□□□□ -0.18
CDCA3-207ENST00000538862 KIAA1958Q8N8K9 716 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 GPR156Q8NFN8 814 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms