RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	NAA20	P61599	178 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	BTN3A2	P78410	334 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CUL3	Q13618	768 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	RAPSN	Q13702	412 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GTF2H2	Q13888	395 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SLC29A2	Q14542	456 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZNF169	Q14929	603 aa	Predicted RBP	11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GGTA1P	Q4G0N0	100 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SFT2D3	Q587I9	215 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GTF2H2C	Q6P1K8	395 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PAPD4	Q6PIY7	484 aa	Known RBP	11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	LANCL3	Q6ZV70	420 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TDRP	Q86YL5	185 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PLD6	Q8N2A8	252 aa	Known RBP	11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DNAJB14	Q8TBM8	379 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	BRIX1	Q8TDN6	353 aa	Known RBP	11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ELP5	Q8TE02	316 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	EXT2	Q93063	718 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PTCHD1	Q96NR3	888 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	RHOXF2	Q9BQY4	288 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MS4A12	Q9NXJ0	267 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	VPS4A	Q9UN37	437 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	HIVEP3	Q5T1R4	2406 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PTPN13	Q12923	2485 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	USP9X	Q93008	2570 aa	Predicted RBP	11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MASP2	O00187	686 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CYR61	O00622	381 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZNF500	O60304	480 aa	Predicted RBP	11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CLDN9	O95484	217 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ITGAM	P11215	1152 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TNFSF10	P50591	281 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MLLT10	P55197	1068 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SLC26A5	P58743	744 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TAS2R50	P59544	299 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ACTN3	Q08043	901 aa	Predicted RBP	11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	RUNX2	Q13950	521 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MEP1A	Q16819	746 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	BTBD16	Q32M84	506 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	FBXO48	Q5FWF7	155 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ABHD17B	Q5VST6	288 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	FAAH2	Q6GMR7	532 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CUZD1	Q86UP6	607 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TMEM151A	Q8N4L1	468 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SLC5A8	Q8N695	610 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CCT6B	Q92526	530 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MESP1	Q9BRJ9	268 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TRIM4	Q9C037	500 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	EPB41L4B	Q9H329	900 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	IPPK	Q9H8X2	491 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ACTR8	Q9H981	624 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	AGPAT4	Q9NRZ5	378 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	KCMF1	Q9P0J7	381 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ABI3	Q9P2A4	366 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	XPR1	Q9UBH6	696 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SPACA6	W5XKT8	324 aa		11.55	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SAGE2P	A6NJ88	616 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	B4GALT2	O60909	372 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CTNS	O60931	367 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DNAJB6	O75190	326 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SEC24D	O94855	1032 aa	Predicted RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SEMA3D	O95025	777 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	RPS17	P08708	135 aa	Known RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	FAM153B	P0C7A2	387 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TAC1	P20366	129 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	HIST1H1T	P22492	207 aa	Predicted RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ATP5A1	P25705	553 aa	Known RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PLA2G16	P53816	162 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	LIM2	P55344	173 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ARG2	P78540	354 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SERTAD2	Q14140	314 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	AP5B1	Q2VPB7	878 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	FAM153C	Q494X1	144 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GOLGA7	Q7Z5G4	137 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	UBE3D	Q7Z6J8	389 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	HOMEZ	Q8IX15	550 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ACOT4	Q8N9L9	421 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	HUS1B	Q8NHY5	278 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	WDR20	Q8TBZ3	569 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TSLP	Q969D9	159 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	RGMA	Q96B86	450 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SNRNP40	Q96DI7	357 aa	Known RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	F2RL3	Q96RI0	385 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MFRP	Q9BY79	579 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DMRT3	Q9NQL9	472 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PRTFDC1	Q9NRG1	225 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZNF358	Q9NW07	568 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	STMN3	Q9NZ72	180 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PTGFRN	Q9P2B2	879 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CPSF2	Q9P2I0	782 aa	Known RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DCDC2	Q9UHG0	476 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PCTP	Q9UKL6	214 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PLAA	Q9Y263	795 aa		11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms