RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 WWOXQ9NZC7 414 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 TXNDC16Q9P2K2 825 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 NPIPA1Q9UND3 350 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 MEMO1Q9Y316 297 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 ZNF407Q9C0G0 2248 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 OTOGQ6ZRI0 2925 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 CTAGE15A4D2H0 777 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 LRIT2A6NDA9 550 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ANKDD1BA6NHY2 528 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 KLRC4-KLRK1H3BQV0 150 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 CLGNO14967 610 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 TP73O15350 636 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ERI3O43414 337 aaKnown RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 DNAJB6O75190 326 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ITGA10O75578 1167 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 MYO1DO94832 1006 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 WISP3O95389 354 aaPredicted RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 CASQ1P31415 396 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 HNRNPH1P31943 449 aaKnown RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 GGT5P36269 586 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 MEOX1P50221 254 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 MTTPP55157 894 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 BTN3A2P78410 334 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 TGM3Q08188 693 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ELAVL1Q15717 326 aaKnown RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 PAGE2BQ5JRK9 111 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ZNF468Q5VIY5 522 aaPredicted RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 SULT1C3Q6IMI6 304 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 LRRC70Q7Z2Q7 622 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 CTAGE6Q86UF2 777 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ZNF227Q86WZ6 799 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 CEP97Q8IW35 865 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ZBED8Q8IZ13 594 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 CYP4Z2PQ8N1L4 340 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 CPSF7Q8N684 471 aaKnown RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 C7orf57Q8NEG2 295 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 OR2L5Q8NG80 312 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ANKRD49Q8WVL7 239 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 MTFMTQ96DP5 389 aaKnown RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 WDR34Q96EX3 536 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 SERINC2Q96SA4 455 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 GPR22Q99680 433 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 RBBP8Q99708 897 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 CPNE1Q99829 537 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 TMEM79Q9BSE2 394 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 EFCAB11Q9BUY7 163 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 TRIM31Q9BZY9 425 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 ROGDIQ9GZN7 287 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 COPS7BQ9H9Q2 264 aaPredicted RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 PRTFDC1Q9NRG1 225 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 DNAJC11Q9NVH1 559 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 F8P00451 2351 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 FBN2P35556 2912 aa8.07□□□□□ -1.12
DDB1-212ENST00000538470 TEP1Q99973 2627 aaKnown RBP8.07□□□□□ -1.12
DDB1-212ENST00000538470 POLQO75417 2590 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 INTS1Q8N201 2190 aaKnown RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 FAM187AA6NFU0 413 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 ACOT7O00154 380 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 STK16O75716 305 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 S100BP04271 92 aaPredicted RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 TUBB4AP04350 444 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 GSTA2P09210 222 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 STMN1P16949 149 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 SERPINB1P30740 379 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 SSTR2P30874 369 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 GP5P40197 560 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 RPL21P46778 160 aaKnown RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 SSR4P51571 173 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 ETF1P62495 437 aaKnown RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 CALCOCO2Q13137 446 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 SLC13A2Q13183 592 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 LAPTM5Q13571 262 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 E2F2Q14209 437 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 EFTUD2Q15029 972 aaKnown RBP eCLIP8.06□□□□□ -1.127e-7■■■■■ 32.8
DDB1-212ENST00000538470 ZKSCAN8Q15776 578 aaPredicted RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 PDK4Q16654 411 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 CYS1Q717R9 158 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 GPSM1Q86YR5 675 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 CHERPQ8IWX8 916 aaKnown RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 TMEM132CQ8N3T6 1108 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 TMEM156Q8N614 296 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 FAM47BQ8NA70 645 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 ZFP62Q8NB50 900 aaPredicted RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 PDPRQ8NCN5 879 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 SRFBP1Q8NEF9 429 aaKnown RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 C16orf52Q8NHV5 167 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 AGAP11Q8TF27 550 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 PYROXD1Q8WU10 500 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 CCT6BQ92526 530 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 DAZLQ92904 295 aaKnown RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 UBE2E3Q969T4 207 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 NCLNQ969V3 563 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 KIAA1191Q96A73 305 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 PTCD3Q96EY7 689 aaKnown RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 QRFPRQ96P65 431 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 DMRTA2Q96SC8 542 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 TRIM8Q9BZR9 551 aa8.06□□□□□ -1.12
DDB1-212ENST00000538470 REXO4Q9GZR2 422 aaKnown RBP8.06□□□□□ -1.12
DDB1-212ENST00000538470 LYRM4Q9HD34 91 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms